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    ST13 ST13 Hsp70 interacting protein [ Bos taurus (domestic cattle) ]

    Gene ID: 510494, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ST13provided by VGNC
    Official Full Name
    ST13 Hsp70 interacting proteinprovided by VGNC
    Primary source
    VGNC:VGNC:58446
    See related
    BGD:BT17933; Ensembl:ENSBTAG00000006202
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ST13 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (112092011..112115729, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 17 Neighboring gene small ribosomal subunit protein eS27-like Neighboring gene uncharacterized LOC112446916 Neighboring gene X-prolyl aminopeptidase 3 Neighboring gene DnaJ heat shock protein family (Hsp40) member B7 Neighboring gene ring-box 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC165934

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Hsp70 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chaperone cofactor-dependent protein refolding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hsc70-interacting protein
    Names
    Hsp70 interacting protein
    heat shock 70kD protein binding protein
    of tumorigenicity 13 - colon carcinoma
    suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101926.2 → NP_001095396.1  hsc70-interacting protein

      See identical proteins and their annotated locations for NP_001095396.1

      Status: PROVISIONAL

      Source sequence(s)
      BC151320
      UniProtKB/TrEMBL
      A0A3Q1MQM3, A7E3S8
      Related
      ENSBTAP00000008146.5, ENSBTAT00000008146.6
      Conserved Domains (5) summary
      smart00727
      Location:319 → 358
      STI1; Heat shock chaperonin-binding motif
      cd14438
      Location:3 → 43
      Hip_N; N-terminal dimerization domain of the Hsp70-interacting protein (Hip) and similar proteins
      sd00006
      Location:147 → 177
      TPR; TPR repeat [structural motif]
      pfam00515
      Location:148 → 180
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:113 → 179
      TPR_11; TPR repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      112092011..112115729 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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