U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    AEBP2 AE binding protein 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 537791, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    AEBP2provided by VGNC
    Official Full Name
    AE binding protein 2provided by VGNC
    Primary source
    VGNC:VGNC:25704
    See related
    BGD:BT18865; EnsemblRapid:ENSBTAG00070024524
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See AEBP2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (90468632..90530352, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene hypoxia-inducible lipid droplet-associated protein-like Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene pleckstrin homology domain containing A5 Neighboring gene ubiquitin-like protein 5 Neighboring gene uncharacterized LOC132345332

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC142819

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESC/E(Z) complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein AEBP2
    Names
    adipocyte enhancer-binding protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083485.3 → NP_001076954.2  zinc finger protein AEBP2

      See identical proteins and their annotated locations for NP_001076954.2

      Status: VALIDATED

      Source sequence(s)
      NKLS02000005
      UniProtKB/Swiss-Prot
      A4FV57
      Related
      ENSBTAP00070033422.1, ENSBTAT00070055527.1
      Conserved Domains (3) summary
      COG5048
      Location:209 → 358
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:260 → 280
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:309 → 335
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      90468632..90530352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010805458.4 → XP_010803760.1  zinc finger protein AEBP2 isoform X1

      See identical proteins and their annotated locations for XP_010803760.1

      UniProtKB/TrEMBL
      A0AAA9TGY3
      Related
      ENSBTAP00070033412.1, ENSBTAT00070055516.1
      Conserved Domains (2) summary
      COG5048
      Location:3 → 123
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:50 → 70
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4FV57.2 GenPept UniProtKB/Swiss-Prot:A4FV57

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.