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    SVOP SV2 related protein [ Bos taurus (domestic cattle) ]

    Gene ID: 510256, updated on 29-Jan-2025

    Summary

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    Official Symbol
    SVOPprovided by VGNC
    Official Full Name
    SV2 related proteinprovided by VGNC
    Primary source
    VGNC:VGNC:35498
    See related
    BGD:BT19826; Ensembl:ENSBTAG00000018833
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SVOP in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (64019338..64092372)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene uracil DNA glycosylase Neighboring gene alkB homolog 2, alpha-ketoglutarate dependent dioxygenase Neighboring gene ubiquitin specific peptidase 30 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene D-amino acid oxidase Neighboring gene slingshot protein phosphatase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. SVOP, an evolutionarily conserved synaptic vesicle protein, suggests novel transport functions of synaptic vesicles. Janz R, et al. J Neurosci, 1998 Nov 15. PMID 9801366, Free PMC Article
    2. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139833

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptic vesicle 2-related protein
    Names
    SV2 related protein homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075441.1 → NP_001068909.1  synaptic vesicle 2-related protein

      See identical proteins and their annotated locations for NP_001068909.1

      Status: PROVISIONAL

      Source sequence(s)
      BT025491
      UniProtKB/Swiss-Prot
      Q17QM3, Q1JP63
      UniProtKB/TrEMBL
      A0A452DIU7
      Related
      ENSBTAP00070024144.1, ENSBTAT00070040638.1
      Conserved Domains (1) summary
      cd17441
      Location:87 → 509
      MFS_SVOP; Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      64019338..64092372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1JP63.1 GenPept UniProtKB/Swiss-Prot:Q1JP63

    Gene LinkOut

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    Research Materials