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    DZIP1 DAZ interacting zinc finger protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506546, updated on 31-Dec-2024

    Summary

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    Official Symbol
    DZIP1provided by VGNC
    Official Full Name
    DAZ interacting zinc finger protein 1provided by VGNC
    Primary source
    VGNC:VGNC:28284
    See related
    BGD:BT21462; Ensembl:ENSBTAG00000003569
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DZIP1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (73010630..73062107, complement)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette sub-family C member 4-like Neighboring gene uncharacterized LOC104973643 Neighboring gene claudin 10 Neighboring gene DnaJ heat shock protein family (Hsp40) member C3 Neighboring gene UDP-glucose glycoprotein glucosyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC142440

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cilium assembly protein DZIP1
    Names
    DAZ interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001110066.3 → NP_001103536.3  cilium assembly protein DZIP1 isoform 1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000012
      Related
      ENSBTAP00000074148.2, ENSBTAT00000085817.2

    2. NM_001435032.1 → NP_001421961.1  cilium assembly protein DZIP1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      NKLS02000012

    3. NM_001435033.1 → NP_001421962.1  cilium assembly protein DZIP1 isoform 3

      Status: VALIDATED

      Source sequence(s)
      NKLS02000012

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      73010630..73062107 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059891986.1 → XP_059747969.1  cilium assembly protein DZIP1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MIL0, A0A3Q1MSE5
      Related
      ENSBTAP00000057415.2, ENSBTAT00000066890.2

    2. XM_059891987.1 → XP_059747970.1  cilium assembly protein DZIP1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MIL0, A0A3Q1MSE5
    Nucleotide Protein Strain
    Heading Accession and Version

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