U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FBH1 F-box DNA helicase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 534383, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    FBH1provided by VGNC
    Official Full Name
    F-box DNA helicase 1provided by VGNC
    Primary source
    VGNC:VGNC:28896
    See related
    Ensembl:ENSBTAG00000004147
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FBXO18
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FBH1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (17565223..17604492, complement)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene interleukin 2 receptor subunit alpha Neighboring gene interleukin 15 receptor subunit alpha Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC112449257 Neighboring gene ankyrin repeat domain-containing protein 7-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC157095

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3'-5' DNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in replication fork processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    F-box DNA helicase 1
    Names
    F-box only protein, helicase, 18
    F-box protein, helicase, 18
    NP_001092533.1
    XP_010809398.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099063.1 → NP_001092533.1  F-box DNA helicase 1

      See identical proteins and their annotated locations for NP_001092533.1

      Status: PROVISIONAL

      Source sequence(s)
      BC142300
      UniProtKB/TrEMBL
      A5PJZ9, F1MSG2
      Related
      ENSBTAP00000005426.5, ENSBTAT00000005426.6
      Conserved Domains (4) summary
      COG0210
      Location:442 → 935
      UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
      pfam12937
      Location:213 → 262
      F-box-like; F-box-like
      pfam13538
      Location:873 → 934
      UvrD_C_2; UvrD-like helicase C-terminal domain
      cl21455
      Location:443 → 687
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      17565223..17604492 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010811096.4 → XP_010809398.1  F-box DNA helicase 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MUV0, F1MSG2
      Related
      ENSBTAP00000074463.2, ENSBTAT00000082535.2
      Conserved Domains (4) summary
      COG0210
      Location:464 → 957
      UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
      pfam12937
      Location:235 → 284
      F-box-like; F-box-like
      pfam13538
      Location:895 → 956
      UvrD_C_2; UvrD-like helicase C-terminal domain
      cl21455
      Location:465 → 709
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials