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    POC1B POC1 centriolar protein B [ Bos taurus (domestic cattle) ]

    Gene ID: 525136, updated on 29-Jan-2025

    Summary

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    Official Symbol
    POC1Bprovided by VGNC
    Official Full Name
    POC1 centriolar protein Bprovided by VGNC
    Primary source
    VGNC:VGNC:50158
    See related
    BGD:BT20715; Ensembl:ENSBTAG00000000687
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    WDR51; BPOC1B
    Orthologs
    human mouse all
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    Genomic context

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    See POC1B in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (19295030..19400065, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107131351 Neighboring gene small ribosomal subunit protein eS6-like Neighboring gene U6 spliceosomal RNA Neighboring gene dapper homolog 3-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 4 Neighboring gene uncharacterized LOC112446834 Neighboring gene small ribosomal subunit protein eS26-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139093

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    POC1 centriolar protein homolog B
    Names
    WD repeat domain 51B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099031.1 → NP_001092501.1  POC1 centriolar protein homolog B

      See identical proteins and their annotated locations for NP_001092501.1

      Status: PROVISIONAL

      Source sequence(s)
      BC142494
      UniProtKB/TrEMBL
      A0A3Q1LUP6, A5PKH9
      Related
      ENSBTAP00070027896.1, ENSBTAT00070046499.1
      Conserved Domains (3) summary
      COG2319
      Location:14 → 321
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:10 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:63 → 100
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      19295030..19400065 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886478.1 → XP_059742461.1  POC1 centriolar protein homolog B isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LUP6, F6QTD1
      Related
      ENSBTAP00070027919.1, ENSBTAT00070046532.1

    2. XM_005206056.5 → XP_005206113.1  POC1 centriolar protein homolog B isoform X3

      See identical proteins and their annotated locations for XP_005206113.1

      UniProtKB/TrEMBL
      A0A3Q1LUP6, A0AAA9S0T0
      Related
      ENSBTAP00070027923.1, ENSBTAT00070046541.1
      Conserved Domains (3) summary
      COG2319
      Location:14 → 321
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:10 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:63 → 100
      7WD40; WD40 repeat [structural motif]

    3. XM_005206054.5 → XP_005206111.1  POC1 centriolar protein homolog B isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MJK6
      Related
      ENSBTAP00070027934.1, ENSBTAT00070046562.1
      Conserved Domains (3) summary
      COG2319
      Location:8 → 282
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:11 → 280
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:45 → 82
      7WD40; WD40 repeat [structural motif]

    4. XM_005206058.5 → XP_005206115.1  POC1 centriolar protein homolog B isoform X5

      Conserved Domains (2) summary
      cd00200
      Location:10 → 298
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:63 → 100
      7WD40; WD40 repeat [structural motif]

    5. XM_015470898.3 → XP_015326384.3  POC1 centriolar protein homolog B isoform X4

    Nucleotide Protein Strain
    Heading Accession and Version

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