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    KCTD6 potassium channel tetramerization domain containing 6 [ Bos taurus (domestic cattle) ]

    Gene ID: 613649, updated on 27-Dec-2024

    Summary

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    Official Symbol
    KCTD6provided by VGNC
    Official Full Name
    potassium channel tetramerization domain containing 6provided by VGNC
    Primary source
    VGNC:VGNC:30514
    See related
    BGD:BT18388; Ensembl:ENSBTAG00000022656
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See KCTD6 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (42870231..42918348, complement)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 107 member A Neighboring gene acyl-CoA oxidase 2 Neighboring gene pyruvate dehydrogenase E1 subunit beta Neighboring gene PX domain containing serine/threonine kinase like Neighboring gene ribonuclease P/MRP subunit p14 Neighboring gene hydroxyacyl-thioester dehydratase type 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein KCTD6
    Names
    potassium channel tetramerisation domain containing 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101224.1 → NP_001094694.1  BTB/POZ domain-containing protein KCTD6

      See identical proteins and their annotated locations for NP_001094694.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148074
      UniProtKB/TrEMBL
      A0A3Q1MF30, A6QLT0, F6Q258
      Conserved Domains (1) summary
      cd18394
      Location:10 → 113
      BTB_POZ_KCTD6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 6 (KCTD6)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      42870231..42918348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015459612.3 → XP_015315098.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258
      Conserved Domains (1) summary
      cl02518
      Location:49 → 137
      BTB; BTB/POZ domain

    2. XM_005222914.5 → XP_005222971.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      See identical proteins and their annotated locations for XP_005222971.1

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258
      Conserved Domains (1) summary
      cl02518
      Location:49 → 137
      BTB; BTB/POZ domain

    3. XM_005222912.5 → XP_005222969.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      See identical proteins and their annotated locations for XP_005222969.1

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258
      Conserved Domains (1) summary
      cl02518
      Location:49 → 137
      BTB; BTB/POZ domain

    4. XM_024982956.2 → XP_024838724.1  BTB/POZ domain-containing protein KCTD6 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MF30, A0AAA9SN90
      Conserved Domains (1) summary
      cl02518
      Location:47 → 135
      BTB; BTB/POZ domain

    5. XM_059879829.1 → XP_059735812.1  BTB/POZ domain-containing protein KCTD6 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MF30, A0AAA9SN90
      Related
      ENSBTAP00000084305.1, ENSBTAT00000107667.1

    6. XM_059879828.1 → XP_059735811.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258

    7. XM_059879827.1 → XP_059735810.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258
      Related
      ENSBTAP00000097460.1, ENSBTAT00000104807.1

    8. XM_024982954.2 → XP_024838722.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258
      Conserved Domains (1) summary
      cl02518
      Location:49 → 137
      BTB; BTB/POZ domain

    9. XM_059879826.1 → XP_059735809.1  BTB/POZ domain-containing protein KCTD6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TKI5, F6Q258

    10. XM_005222918.5 → XP_005222975.1  BTB/POZ domain-containing protein KCTD6 isoform X5

      See identical proteins and their annotated locations for XP_005222975.1

      UniProtKB/TrEMBL
      A0A3Q1MF30, A6QLT0, F6Q258
      Related
      ENSBTAP00000085807.1, ENSBTAT00000134884.1
      Conserved Domains (1) summary
      cd18394
      Location:10 → 113
      BTB_POZ_KCTD6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 6 (KCTD6)

    11. XM_059879825.1 → XP_059735808.1  BTB/POZ domain-containing protein KCTD6 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LWW6, A0A3Q1MF30
      Related
      ENSBTAP00000059966.2, ENSBTAT00000071132.2

    12. XM_059879830.1 → XP_059735813.1  BTB/POZ domain-containing protein KCTD6 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MF30, A6QLT0, F6Q258

    13. XM_005222917.4 → XP_005222974.1  BTB/POZ domain-containing protein KCTD6 isoform X5

      See identical proteins and their annotated locations for XP_005222974.1

      UniProtKB/TrEMBL
      A0A3Q1MF30, A6QLT0, F6Q258
      Conserved Domains (1) summary
      cd18394
      Location:10 → 113
      BTB_POZ_KCTD6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 6 (KCTD6)

    14. XM_015459613.3 → XP_015315099.1  BTB/POZ domain-containing protein KCTD6 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MF30, A6QLT0, F6Q258
      Conserved Domains (1) summary
      cd18394
      Location:10 → 113
      BTB_POZ_KCTD6; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in potassium channel tetramerization domain-containing protein 6 (KCTD6)

    15. XM_024982951.2 → XP_024838719.1  BTB/POZ domain-containing protein KCTD6 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SQC8, F6Q258
      Related
      ENSBTAP00000086204.1, ENSBTAT00000094967.1
      Conserved Domains (1) summary
      cl02518
      Location:78 → 166
      BTB; BTB/POZ domain
    Nucleotide Protein Strain
    Heading Accession and Version

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