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    FAR1 fatty acyl-CoA reductase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 525262, updated on 27-Dec-2024

    Summary

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    Official Symbol
    FAR1provided by VGNC
    Official Full Name
    fatty acyl-CoA reductase 1provided by VGNC
    Primary source
    VGNC:VGNC:28863
    See related
    BGD:BT14858; Ensembl:ENSBTAG00000009061
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MLSTD2
    Orthologs
    human mouse all
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    Genomic context

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    See FAR1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (38990383..39068184, complement)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene spondin 1 Neighboring gene microRNA mir-2284t Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene microRNA mir-2285b-1 Neighboring gene small nucleolar RNA SNORA3/SNORA45 family Neighboring gene parathyroid hormone

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139098

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in long-chain fatty-acyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    fatty acyl-CoA reductase 1
    Names
    male sterility domain containing 2
    NP_001092502.1
    XP_005216030.1
    XP_010810766.1
    XP_059730737.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001099032.1 → NP_001092502.1  fatty acyl-CoA reductase 1

      See identical proteins and their annotated locations for NP_001092502.1

      Status: PROVISIONAL

      Source sequence(s)
      BC142197
      UniProtKB/TrEMBL
      A0AAA9S5T4, A5PJQ0
      Related
      ENSBTAP00000011940.5, ENSBTAT00000011940.6
      Conserved Domains (2) summary
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      pfam03015
      Location:357 → 447
      Sterile; Male sterility protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      38990383..39068184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005215973.5 → XP_005216030.1  fatty acyl-CoA reductase 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9S5T4, A0AAA9TC27
      Related
      ENSBTAP00000095602.1, ENSBTAT00000113832.1
      Conserved Domains (3) summary
      cd09071
      Location:355 → 446
      FAR_C; C-terminal domain of fatty acyl CoA reductases
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      PLN02996
      Location:2 → 446
      PLN02996; fatty acyl-CoA reductase

    2. XM_059874754.1 → XP_059730737.1  fatty acyl-CoA reductase 1 isoform X2

      UniProtKB/TrEMBL
      A0AAA9S5T4, A5PJQ0

    3. XM_010812464.4 → XP_010810766.1  fatty acyl-CoA reductase 1 isoform X2

      See identical proteins and their annotated locations for XP_010810766.1

      UniProtKB/TrEMBL
      A0AAA9S5T4, A5PJQ0
      Conserved Domains (2) summary
      cd05236
      Location:11 → 330
      FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
      pfam03015
      Location:357 → 447
      Sterile; Male sterility protein
    Nucleotide Protein Strain
    Heading Accession and Version

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