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    COLEC11 collectin subfamily member 11 [ Bos taurus (domestic cattle) ]

    Gene ID: 613991, updated on 30-Jan-2025

    Summary

    Official Symbol
    COLEC11provided by VGNC
    Official Full Name
    collectin subfamily member 11provided by VGNC
    Primary source
    VGNC:VGNC:27578
    See related
    BGD:BT10273; EnsemblRapid:ENSBTAG00070012719
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See COLEC11 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (110960692..110983719, complement)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2C Neighboring gene allantoicase Neighboring gene uncharacterized LOC132346023 Neighboring gene ribosomal protein S7 Neighboring gene ribonuclease H1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Pathways from PubChem

    General protein information

    Preferred Names
    collectin-11
    Names
    CL-K1
    collectin kidney protein 1
    collectin sub-family member 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076303.2NP_001069771.1  collectin-11 precursor

      Status: PROVISIONAL

      Source sequence(s)
      BC118358
      UniProtKB/Swiss-Prot
      Q17QH6
      UniProtKB/TrEMBL
      A0A3Q1M944
      Related
      ENSBTAP00070017619.1, ENSBTAT00070028893.1
      Conserved Domains (2) summary
      cd03591
      Location:147262
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:3673
      Collagen; Collagen triple helix repeat (20 copies)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      110960692..110983719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059889236.1XP_059745219.1  collectin-11 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M944, A0A3Q1N764
      Related
      ENSBTAP00070017657.1, ENSBTAT00070028951.1