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    DRAP1 DR1 associated protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 540345, updated on 1-Jan-2025

    Summary

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    Official Symbol
    DRAP1provided by VGNC
    Official Full Name
    DR1 associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:28203
    See related
    BGD:BT25161; Ensembl:ENSBTAG00000006199
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DRAP1 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (44028375..44030507)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene FOS like 1, AP-1 transcription factor subunit Neighboring gene chromosome 29 C11orf68 homolog Neighboring gene uncharacterized LOC104976284 Neighboring gene testis specific 10 interacting protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC134551

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables core promoter sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of negative cofactor 2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dr1-associated corepressor
    Names
    DR1-associated protein 1 (negative cofactor 2 alpha)
    NC2-alpha
    negative co-factor 2-alpha
    negative cofactor 2-alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076214.1 → NP_001069682.1  dr1-associated corepressor

      See identical proteins and their annotated locations for NP_001069682.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110127
      UniProtKB/Swiss-Prot
      Q2YDP3
      UniProtKB/TrEMBL
      A0AAA9SKK0
      Related
      ENSBTAP00000008142.5, ENSBTAT00000008142.6
      Conserved Domains (1) summary
      cl28542
      Location:2 → 92
      BUR6; Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      44028375..44030507
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005227161.5 → XP_005227218.1  dr1-associated corepressor isoform X1

      Conserved Domains (2) summary
      pfam00808
      Location:11 → 74
      CBFD_NFYB_HMF; Histone-like transcription factor (CBF/NF-Y) and archaeal histone
      pfam15344
      Location:113 → 184
      FAM217; FAM217 family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2YDP3.1 GenPept UniProtKB/Swiss-Prot:Q2YDP3

    Gene LinkOut

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    Research Materials