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    OXSM 3-oxoacyl-ACP synthase, mitochondrial [ Bos taurus (domestic cattle) ]

    Gene ID: 513530, updated on 1-Jan-2025

    Summary

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    Official Symbol
    OXSMprovided by VGNC
    Official Full Name
    3-oxoacyl-ACP synthase, mitochondrialprovided by VGNC
    Primary source
    VGNC:VGNC:32513
    See related
    BGD:BT29411; Ensembl:ENSBTAG00000007031
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See OXSM in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (40006882..40010272, complement)

    Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132344074 Neighboring gene uncharacterized LOC100847782 Neighboring gene uncharacterized LOC112444632 Neighboring gene N-glycanase 1 Neighboring gene microRNA mir-2401

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC142360

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
    Names
    beta-ketoacyl-ACP synthase
    NP_001069092.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075624.2 → NP_001069092.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial precursor

      See identical proteins and their annotated locations for NP_001069092.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120268
      UniProtKB/Swiss-Prot
      Q0VCA7
      UniProtKB/TrEMBL
      F1MXW5
      Related
      ENSBTAP00000009250.2, ENSBTAT00000009250.4
      Conserved Domains (2) summary
      cd00834
      Location:43 → 457
      KAS_I_II; Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen ...
      TIGR03150
      Location:43 → 456
      fabF; beta-ketoacyl-acyl-carrier-protein synthase II

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      40006882..40010272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VCA7.1 GenPept UniProtKB/Swiss-Prot:Q0VCA7

    Gene LinkOut

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    Research Materials