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    PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 513924, updated on 27-Dec-2024

    Summary

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    Official Symbol
    PSTPIP1provided by VGNC
    Official Full Name
    proline-serine-threonine phosphatase interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:33486
    See related
    BGD:BT21843; Ensembl:ENSBTAG00000021144
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PSTPIP1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 21 NC_037348.1 (32115832..32160462)

    Chromosome 21 - NC_037348.1Genomic Context describing neighboring genes Neighboring gene S-phase cyclin A associated protein in the ER Neighboring gene reticulocalbin 2 Neighboring gene uncharacterized LOC100847412 Neighboring gene tetraspanin 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037348.1 Chromosome 21 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-serine-threonine phosphatase-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193040.1 → NP_001179969.1  proline-serine-threonine phosphatase-interacting protein 1

      See identical proteins and their annotated locations for NP_001179969.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000021
      UniProtKB/TrEMBL
      A0AAA9RSR0
      Related
      ENSBTAP00000065401.2, ENSBTAT00000071841.2
      Conserved Domains (2) summary
      cd11824
      Location:363 → 415
      SH3_PSTPIP1; Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1
      cl12013
      Location:16 → 257
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037348.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      32115832..32160462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024981742.2 → XP_024837510.1  proline-serine-threonine phosphatase-interacting protein 1 isoform X2

      Conserved Domains (1) summary
      cl12013
      Location:16 → 298
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_024981739.2 → XP_024837507.1  proline-serine-threonine phosphatase-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RSR0, F1MZI1
      Related
      ENSBTAP00000028179.6, ENSBTAT00000028179.7
      Conserved Domains (2) summary
      cd11824
      Location:404 → 456
      SH3_PSTPIP1; Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1
      cl12013
      Location:16 → 298
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    3. XM_010817061.4 → XP_010815363.1  proline-serine-threonine phosphatase-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0AAA9RSR0
      Conserved Domains (2) summary
      cd11824
      Location:298 → 350
      SH3_PSTPIP1; Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1
      cl12013
      Location:18 → 192
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    4. XM_005221936.5 → XP_005221993.1  proline-serine-threonine phosphatase-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0AAA9RSR0
      Conserved Domains (2) summary
      cd11824
      Location:280 → 332
      SH3_PSTPIP1; Src homology 3 domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1
      cl12013
      Location:1 → 174
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein Strain
    Heading Accession and Version

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