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    WDR26 WD repeat domain 26 [ Bos taurus (domestic cattle) ]

    Gene ID: 767999, updated on 27-Dec-2024

    Summary

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    Official Symbol
    WDR26provided by VGNC
    Official Full Name
    WD repeat domain 26provided by VGNC
    Primary source
    VGNC:VGNC:36889
    See related
    Ensembl:ENSBTAG00000011785
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See WDR26 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (27552362..27592544, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101905510 Neighboring gene cornichon family AMPA receptor auxiliary protein 4 Neighboring gene palmitoyltransferase ZDHHC4-like Neighboring gene cornichon family AMPA receptor auxiliary protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC134185

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077059.1 → NP_001070527.1  WD repeat-containing protein 26

      Status: PROVISIONAL

      Source sequence(s)
      BC109897
      UniProtKB/TrEMBL
      F1MLE4, Q2TBM8
      Conserved Domains (4) summary
      smart00668
      Location:9 → 84
      CTLH; C-terminal to LisH motif
      COG2319
      Location:199 → 494
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:202 → 494
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:212 → 252
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27552362..27592544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005216853.4 → XP_005216910.1  WD repeat-containing protein 26 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TUW2
      Related
      ENSBTAP00000034100.5, ENSBTAT00000034200.6
      Conserved Domains (3) summary
      smart00668
      Location:157 → 216
      CTLH; C-terminal to LisH motif
      cd00200
      Location:334 → 626
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:344 → 384
      7WD40; WD40 repeat [structural motif]

    2. XM_005216854.5 → XP_005216911.1  WD repeat-containing protein 26 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TUW2
      Related
      ENSBTAP00000079986.1, ENSBTAT00000132912.1
      Conserved Domains (3) summary
      smart00668
      Location:157 → 232
      CTLH; C-terminal to LisH motif
      cd00200
      Location:350 → 642
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:360 → 400
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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