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    DERA deoxyribose-phosphate aldolase [ Bos taurus (domestic cattle) ]

    Gene ID: 534558, updated on 29-Jan-2025

    Summary

    Official Symbol
    DERAprovided by VGNC
    Official Full Name
    deoxyribose-phosphate aldolaseprovided by VGNC
    Primary source
    VGNC:VGNC:28009
    See related
    BGD:BT21295; Ensembl:ENSBTAG00000022167
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See DERA in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (93887855..94006820, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 15 member 5 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene cytochrome c oxidase subunit VIb pseudogene Neighboring gene small nucleolar RNA SNORA23 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene epidermal growth factor receptor pathway substrate 8 Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC126989

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables deoxyribose-phosphate aldolase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in deoxyribonucleotide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    deoxyribose-phosphate aldolase
    Names
    2-deoxy-D-ribose 5-phosphate aldolase
    2-deoxyribose-5-phosphate aldolase homolog
    deoxyriboaldolase
    phosphodeoxyriboaldolase
    putative deoxyribose-phosphate aldolase
    NP_001069496.1
    XP_059742534.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076028.2NP_001069496.1  deoxyribose-phosphate aldolase

      See identical proteins and their annotated locations for NP_001069496.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102242
      UniProtKB/Swiss-Prot
      Q3T0V9
      UniProtKB/TrEMBL
      A0A3Q1MHS3
      Related
      ENSBTAP00070038006.1, ENSBTAT00070063309.1
      Conserved Domains (1) summary
      cd00959
      Location:50277
      DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      93887855..94006820 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886551.1XP_059742534.1  deoxyribose-phosphate aldolase isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MHS3