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    RBMS2 RNA binding motif single stranded interacting protein 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 509798, updated on 1-Jan-2025

    Summary

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    Official Symbol
    RBMS2provided by VGNC
    Official Full Name
    RNA binding motif single stranded interacting protein 2provided by VGNC
    Primary source
    VGNC:VGNC:33810
    See related
    BGD:BT10507; Ensembl:ENSBTAG00000017830
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RBMS2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (56832141..56910347, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446708 Neighboring gene ATP synthase F1 subunit beta Neighboring gene microRNA mir-677 Neighboring gene bromodomain adjacent to zinc finger domain 2A Neighboring gene glutaminase 2 Neighboring gene SPRY domain containing 4 Neighboring gene major intrinsic protein of lens fiber

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128164

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding motif, single-stranded-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034365.2 → NP_001029537.1  RNA-binding motif, single-stranded-interacting protein 2

      See identical proteins and their annotated locations for NP_001029537.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102935
      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30
      Related
      ENSBTAP00000023705.3, ENSBTAT00000023705.4
      Conserved Domains (2) summary
      cd12474
      Location:135 → 220
      RRM2_MSSP2; RNA recognition motif 2 found in vertebrate single-stranded DNA-binding protein MSSP-2
      cl17169
      Location:51 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      56832141..56910347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015471079.3 → XP_015326565.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30
      Conserved Domains (2) summary
      cd12474
      Location:135 → 220
      RRM2_MSSP2; RNA recognition motif 2 found in vertebrate single-stranded DNA-binding protein MSSP-2
      cl17169
      Location:51 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. XM_059886245.1 → XP_059742228.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30

    3. XM_059886243.1 → XP_059742226.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30

    4. XM_059886242.1 → XP_059742225.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30

    5. XM_059886244.1 → XP_059742227.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30

    6. XM_005206539.5 → XP_005206596.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      See identical proteins and their annotated locations for XP_005206596.1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30
      Conserved Domains (2) summary
      cd12474
      Location:135 → 220
      RRM2_MSSP2; RNA recognition motif 2 found in vertebrate single-stranded DNA-binding protein MSSP-2
      cl17169
      Location:51 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    7. XM_010805144.4 → XP_010803446.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X1

      See identical proteins and their annotated locations for XP_010803446.1

      UniProtKB/Swiss-Prot
      Q3ZC34
      UniProtKB/TrEMBL
      A0AAF7AF30
      Conserved Domains (2) summary
      cd12474
      Location:135 → 220
      RRM2_MSSP2; RNA recognition motif 2 found in vertebrate single-stranded DNA-binding protein MSSP-2
      cl17169
      Location:51 → 134
      RRM_SF; RNA recognition motif (RRM) superfamily

    8. XM_059886246.1 → XP_059742229.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      A0AAF7AF30

    9. XM_059886247.1 → XP_059742230.1  RNA-binding motif, single-stranded-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      A0AAF7AF30
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZC34.1 GenPept UniProtKB/Swiss-Prot:Q3ZC34

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