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    AP1G2 adaptor related protein complex 1 subunit gamma 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 100126076, updated on 1-Jan-2025

    Summary

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    Official Symbol
    AP1G2provided by VGNC
    Official Full Name
    adaptor related protein complex 1 subunit gamma 2provided by VGNC
    Primary source
    VGNC:VGNC:25978
    See related
    Ensembl:ENSBTAG00000007099
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See AP1G2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (21381104..21389481)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112448551 Neighboring gene uncharacterized LOC101905427 Neighboring gene junctophilin 4 Neighboring gene thiamine triphosphatase Neighboring gene zinc finger homeobox 2 Neighboring gene neuroguidin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC159942

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to vacuole transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-1 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-1 complex subunit gamma-like 2
    Names
    adaptor related protein complex 1 gamma 2 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109808.1 → NP_001103278.1  AP-1 complex subunit gamma-like 2

      See identical proteins and their annotated locations for NP_001103278.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149792
      UniProtKB/TrEMBL
      A0A3Q1MCG2, A8E4N0
      Related
      ENSBTAP00000068515.1, ENSBTAT00000078889.2
      Conserved Domains (2) summary
      smart00809
      Location:543 → 651
      Alpha_adaptinC2; Adaptin C-terminal domain
      pfam01602
      Location:1 → 446
      Adaptin_N; Adaptin N terminal region

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      21381104..21389481
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010808858.4 → XP_010807160.3  AP-1 complex subunit gamma-like 2 isoform X2

      Conserved Domains (1) summary
      pfam01602
      Location:24 → 575
      Adaptin_N; Adaptin N terminal region

    2. XM_005211248.5 → XP_005211305.4  AP-1 complex subunit gamma-like 2 isoform X1

      UniProtKB/TrEMBL
      F6QYT8
      Related
      ENSBTAP00000050701.2, ENSBTAT00000055864.3
      Conserved Domains (2) summary
      pfam01602
      Location:24 → 575
      Adaptin_N; Adaptin N terminal region
      pfam02883
      Location:668 → 780
      Alpha_adaptinC2; Adaptin C-terminal domain

    3. XM_059890177.1 → XP_059746160.1  AP-1 complex subunit gamma-like 2 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MCG2
    Nucleotide Protein Strain
    Heading Accession and Version

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