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    ATPSCKMT ATP synthase c subunit lysine N-methyltransferase [ Bos taurus (domestic cattle) ]

    Gene ID: 525138, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ATPSCKMTprovided by VGNC
    Official Full Name
    ATP synthase c subunit lysine N-methyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:28760
    See related
    BGD:BT18696; Ensembl:ENSBTAG00000017885
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FAM173B
    Orthologs
    human mouse all
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    Genomic context

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    See ATPSCKMT in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (62994144..63019045)

    Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112443044 Neighboring gene carboxymethylenebutenolidase homolog Neighboring gene uncharacterized LOC132343252 Neighboring gene chaperonin containing TCP1 subunit 5 Neighboring gene taste 2 receptor member 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine trimethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proton-transporting ATP synthase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitochondrial ATP synthesis coupled proton transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP synthase subunit C lysine N-methyltransferase
    Names
    family with sequence similarity 173 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      62994144..63019045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024981532.2 → XP_024837300.1  ATP synthase subunit C lysine N-methyltransferase isoform X3

      UniProtKB/TrEMBL
      A0AAA9T4U9
      Conserved Domains (1) summary
      cl17173
      Location:92 → 163
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. XM_024981530.2 → XP_024837298.1  ATP synthase subunit C lysine N-methyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MQ31
      Related
      ENSBTAP00000073661.2, ENSBTAT00000080039.2
      Conserved Domains (1) summary
      cl17173
      Location:92 → 172
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    3. XM_024981531.2 → XP_024837299.1  ATP synthase subunit C lysine N-methyltransferase isoform X2

      UniProtKB/TrEMBL
      A0AAA9S5S9
      Conserved Domains (1) summary
      cl17173
      Location:92 → 163
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein Strain
    Heading Accession and Version

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