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    HNRNPL heterogeneous nuclear ribonucleoprotein L [ Bos taurus (domestic cattle) ]

    Gene ID: 504520, updated on 29-Jan-2025

    Summary

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    Official Symbol
    HNRNPLprovided by VGNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein Lprovided by VGNC
    Primary source
    VGNC:VGNC:54437
    See related
    BGD:BT13610; Ensembl:ENSBTAG00000001055
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPL in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (48557658..48571765, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene galectin 4 Neighboring gene enoyl-CoA hydratase 1 Neighboring gene Ras and Rab interactor like Neighboring gene sirtuin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192030.2 → NP_001178959.1  heterogeneous nuclear ribonucleoprotein L

      See identical proteins and their annotated locations for NP_001178959.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      E1BIB4
      Related
      ENSBTAP00070024668.1, ENSBTAT00070041353.1
      Conserved Domains (1) summary
      TIGR01649
      Location:99 → 586
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      48557658..48571765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005218913.5 → XP_005218970.1  heterogeneous nuclear ribonucleoprotein L isoform X2

      See identical proteins and their annotated locations for XP_005218970.1

      Conserved Domains (1) summary
      TIGR01649
      Location:1 → 454
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family

    2. XM_024978014.2 → XP_024833782.1  heterogeneous nuclear ribonucleoprotein L isoform X1

      UniProtKB/TrEMBL
      A0AAA9T365
      Related
      ENSBTAP00070024664.1, ENSBTAT00070041344.1
      Conserved Domains (1) summary
      TIGR01649
      Location:99 → 623
      hnRNP-L_PTB; hnRNP-L/PTB/hephaestus splicing factor family
    Nucleotide Protein Strain
    Heading Accession and Version

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