U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LNPK lunapark, ER junction formation factor [ Bos taurus (domestic cattle) ]

    Gene ID: 533298, updated on 29-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    LNPKprovided by VGNC
    Official Full Name
    lunapark, ER junction formation factorprovided by VGNC
    Primary source
    VGNC:VGNC:30945
    See related
    BGD:BT27676; Ensembl:ENSBTAG00000018061
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    KIAA1715
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LNPK in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (20905194..21004650)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene even-skipped homeobox 2 Neighboring gene small ribosomal subunit protein uS12-like Neighboring gene high mobility group protein B3-like Neighboring gene uncharacterized LOC112442314

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC139734

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum tubular network organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum tubular network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    endoplasmic reticulum junction formation protein lunapark

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075989.1 → NP_001069457.1  endoplasmic reticulum junction formation protein lunapark

      See identical proteins and their annotated locations for NP_001069457.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119896
      UniProtKB/TrEMBL
      A0A3Q1MTL7, Q0VD11
      Related
      ENSBTAP00070006060.1, ENSBTAT00070010672.1
      Conserved Domains (2) summary
      pfam10058
      Location:255 → 305
      zinc_ribbon_10; Predicted integral membrane zinc-ribbon metal-binding protein
      cl26464
      Location:152 → 250
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      20905194..21004650
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875173.1 → XP_059731156.1  endoplasmic reticulum junction formation protein lunapark isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MTL7, Q0VD11

    2. XM_024975635.2 → XP_024831403.1  endoplasmic reticulum junction formation protein lunapark isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MTL7, Q0VD11
      Related
      ENSBTAP00070006068.1, ENSBTAT00070010680.1
      Conserved Domains (2) summary
      pfam10058
      Location:255 → 305
      zinc_ribbon_10; Predicted integral membrane zinc-ribbon metal-binding protein
      cl26464
      Location:152 → 250
      Atrophin-1; Atrophin-1 family

    3. XM_024975640.2 → XP_024831408.1  endoplasmic reticulum junction formation protein lunapark isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MAH3, A0A3Q1MTL7
      Conserved Domains (2) summary
      pfam10058
      Location:255 → 305
      zinc_ribbon_10; Predicted integral membrane zinc-ribbon metal-binding protein
      cl26464
      Location:152 → 250
      Atrophin-1; Atrophin-1 family

    4. XM_024975636.2 → XP_024831404.1  endoplasmic reticulum junction formation protein lunapark isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MTL7, A0A3Q1MVD3
      Conserved Domains (2) summary
      pfam10058
      Location:255 → 305
      zinc_ribbon_10; Predicted integral membrane zinc-ribbon metal-binding protein
      cl26464
      Location:152 → 250
      Atrophin-1; Atrophin-1 family

    5. XM_059875182.1 → XP_059731165.1  endoplasmic reticulum junction formation protein lunapark isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MTL7

    6. XM_024975641.2 → XP_024831409.1  endoplasmic reticulum junction formation protein lunapark isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MTL7
      Conserved Domains (2) summary
      pfam10058
      Location:171 → 221
      zinc_ribbon_10; Predicted integral membrane zinc-ribbon metal-binding protein
      cl26464
      Location:68 → 166
      Atrophin-1; Atrophin-1 family

    7. XM_059875185.1 → XP_059731168.1  endoplasmic reticulum junction formation protein lunapark isoform X6

      Related
      ENSBTAP00070006050.1, ENSBTAT00070010662.1

    RNA

    1. XR_009490729.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.