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    RPS13 ribosomal protein S13 [ Bos taurus (domestic cattle) ]

    Gene ID: 535668, updated on 27-Dec-2024

    Summary

    Gene symbol
    RPS13
    Gene description
    ribosomal protein S13
    See related
    BGD:BT28708; Ensembl:ENSBTAG00000040308
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See RPS13 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (35408334..35411055)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene adenosine kinase-like Neighboring gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha Neighboring gene U6 spliceosomal RNA Neighboring gene pleckstrin homology domain containing A7 Neighboring gene chromosome 15 C11orf58 homolog Neighboring gene SRY-box transcription factor 6

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables small ribosomal subunit rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    small ribosomal subunit protein uS15
    Names
    40S ribosomal protein S13
    NP_001020513.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025342.2NP_001020513.1  small ribosomal subunit protein uS15

      See identical proteins and their annotated locations for NP_001020513.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102749
      UniProtKB/Swiss-Prot
      Q56JX8
      UniProtKB/TrEMBL
      E1BGR6
      Related
      ENSBTAP00000052105.2, ENSBTAT00000055693.3
      Conserved Domains (1) summary
      PTZ00072
      Location:4151
      PTZ00072; 40S ribosomal protein S13; Provisional

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      35408334..35411055
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)