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    MSL3 MSL complex subunit 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 515220, updated on 29-Jan-2025

    Summary

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    Gene symbol
    MSL3
    Gene description
    MSL complex subunit 3
    See related
    BGD:BT25693; Ensembl:ENSBTAG00000009278
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MSL3L1
    Orthologs
    human mouse all
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    Genomic context

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    See MSL3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (131750626..131766122, complement)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene Rho GTPase activating protein 6 Neighboring gene uncharacterized LOC104970453 Neighboring gene midline 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in chromatin organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MSL complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NuA4 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MSL complex subunit 3
    Names
    male-specific lethal 3-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192404.1 → NP_001179333.1  MSL complex subunit 3

      See identical proteins and their annotated locations for NP_001179333.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000030
      UniProtKB/TrEMBL
      E1BFW0
      Related
      ENSBTAP00070036519.1, ENSBTAT00070061382.1
      Conserved Domains (3) summary
      pfam05712
      Location:147 → 505
      MRG; MRG
      pfam11717
      Location:14 → 73
      Tudor-knot; RNA binding activity-knot of a chromodomain
      pfam12258
      Location:308 → 412
      Microcephalin; Microcephalin protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      131750626..131766122 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024987953.2 → XP_024843721.1  MSL complex subunit 3 isoform X1

      UniProtKB/TrEMBL
      A0AAA9S2M9
      Related
      ENSBTAP00070036478.1, ENSBTAT00070061313.1
      Conserved Domains (2) summary
      pfam05712
      Location:6 → 340
      MRG
      pfam12258
      Location:143 → 247
      Microcephalin; Microcephalin protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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