U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MIA3 MIA SH3 domain ER export factor 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 509133, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MIA3provided by VGNC
    Official Full Name
    MIA SH3 domain ER export factor 3provided by VGNC
    Primary source
    VGNC:VGNC:31454
    See related
    BGD:BT19165; Ensembl:ENSBTAG00000018824
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MIA3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (26096947..26159184)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene HHIP like 2 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit A Neighboring gene microRNA mir-11975 Neighboring gene axin interactor, dorsalization associated Neighboring gene BRO1 domain and CAAX motif containing Neighboring gene family with sequence similarity 177 member B

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle cargo loading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transport and Golgi organization protein 1 homolog
    Names
    MIA family member 3, ER export factor
    TANGO1
    melanoma inhibitory activity family, member 3
    melanoma inhibitory activity protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166571.2 → NP_001160043.2  transport and Golgi organization protein 1 homolog precursor

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000016
      UniProtKB/Swiss-Prot
      Q0VC16
      UniProtKB/TrEMBL
      G5E5L5
      Related
      ENSBTAP00000025055.6, ENSBTAT00000025055.7
      Conserved Domains (5) summary
      cd11893
      Location:37 → 109
      SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
      cl25732
      Location:1196 → 1530
      SMC_N; RecF/RecN/SMC N terminal domain
      cl25751
      Location:735 → 912
      DUF4045; Domain of unknown function (DUF4045)
      cl26464
      Location:1642 → 1900
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:129 → 523
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      26096947..26159184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024976152.2 → XP_024831920.1  transport and Golgi organization protein 1 homolog isoform X1

      UniProtKB/Swiss-Prot
      Q0VC16
      UniProtKB/TrEMBL
      A0A3Q1M2R2
      Related
      ENSBTAP00000067728.1, ENSBTAT00000069642.2
      Conserved Domains (5) summary
      cd11893
      Location:37 → 109
      SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
      cl25732
      Location:1196 → 1530
      SMC_N; RecF/RecN/SMC N terminal domain
      cl25751
      Location:735 → 912
      DUF4045; Domain of unknown function (DUF4045)
      cl26464
      Location:1642 → 1929
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:129 → 523
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    2. XM_024976153.2 → XP_024831921.1  transport and Golgi organization protein 1 homolog isoform X2

      UniProtKB/Swiss-Prot
      Q0VC16
      Conserved Domains (5) summary
      cd11893
      Location:37 → 109
      SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
      cl25732
      Location:1196 → 1530
      SMC_N; RecF/RecN/SMC N terminal domain
      cl25751
      Location:735 → 912
      DUF4045; Domain of unknown function (DUF4045)
      cl26464
      Location:1644 → 1891
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:129 → 523
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    3. XM_024976155.2 → XP_024831923.1  transport and Golgi organization protein 1 homolog isoform X4

      UniProtKB/Swiss-Prot
      Q0VC16
      UniProtKB/TrEMBL
      A0A3Q1MNU0
      Related
      ENSBTAP00000073568.1, ENSBTAT00000070003.2
      Conserved Domains (5) summary
      cd11893
      Location:37 → 109
      SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
      cl25732
      Location:1196 → 1530
      SMC_N; RecF/RecN/SMC N terminal domain
      cl25751
      Location:735 → 912
      DUF4045; Domain of unknown function (DUF4045)
      cl26464
      Location:1642 → 1882
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:129 → 523
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    4. XM_059875332.1 → XP_059731315.1  transport and Golgi organization protein 1 homolog isoform X3

      UniProtKB/Swiss-Prot
      Q0VC16

    5. XM_024976156.2 → XP_024831924.1  transport and Golgi organization protein 1 homolog isoform X5

      Conserved Domains (2) summary
      cl25732
      Location:77 → 411
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:523 → 810
      Atrophin-1; Atrophin-1 family

    6. XM_024976157.2 → XP_024831925.1  transport and Golgi organization protein 1 homolog isoform X6

      UniProtKB/TrEMBL
      A0AAA9SG20
      Related
      ENSBTAP00000085117.1, ENSBTAT00000122059.1
      Conserved Domains (2) summary
      cl25732
      Location:77 → 411
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:523 → 781
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VC16.2 GenPept UniProtKB/Swiss-Prot:Q0VC16

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials