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    RNF183 ring finger protein 183 [ Bos taurus (domestic cattle) ]

    Gene ID: 539200, updated on 1-Jan-2025

    Summary

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    Official Symbol
    RNF183provided by VGNC
    Official Full Name
    ring finger protein 183provided by VGNC
    Primary source
    VGNC:VGNC:34041
    See related
    BGD:BT15775; Ensembl:ENSBTAG00000004572
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RNF183 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (102543065..102550911, complement)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene pre-mRNA processing factor 4 Neighboring gene small ribosomal subunit protein eS19-like Neighboring gene uncharacterized LOC104969449 Neighboring gene cyclin-dependent kinase 4-like Neighboring gene WD repeat domain 31 Neighboring gene B-box and SPRY domain containing

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128943

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to endoplasmic reticulum stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF183
    Names
    probable E3 ubiquitin-protein ligase RNF183
    NP_001030499.1
    XP_005210602.1
    XP_059745167.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035422.1 → NP_001030499.1  E3 ubiquitin-protein ligase RNF183

      See identical proteins and their annotated locations for NP_001030499.1

      Status: PROVISIONAL

      Source sequence(s)
      BC104611
      UniProtKB/Swiss-Prot
      Q3SWY0
      Related
      ENSBTAP00000064416.2, ENSBTAT00000072865.2
      Conserved Domains (1) summary
      pfam13639
      Location:9 → 58
      zf-RING_2; Ring finger domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      102543065..102550911 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059889184.1 → XP_059745167.1  E3 ubiquitin-protein ligase RNF183 isoform X1

    2. XM_005210545.5 → XP_005210602.1  E3 ubiquitin-protein ligase RNF183 isoform X2

      UniProtKB/TrEMBL
      A0A452DI10
      Related
      ENSBTAP00000006005.4, ENSBTAT00000006005.4
      Conserved Domains (1) summary
      pfam13639
      Location:63 → 112
      zf-RING_2; Ring finger domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SWY0.1 GenPept UniProtKB/Swiss-Prot:Q3SWY0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials