U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC511425 acyl-CoA dehydrogenase family, member 10 [ Bos taurus (domestic cattle) ]

    Gene ID: 511425, updated on 1-Jan-2025

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC511425
    Gene description
    acyl-CoA dehydrogenase family, member 10
    See related
    Ensembl:ENSBTAG00000001164
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC511425 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (55400988..55450323)

    Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family member 10 Neighboring gene uncharacterized LOC132342616 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene probable ATP-dependent RNA helicase DDX5 Neighboring gene ras-related protein Rap-1b-like Neighboring gene uncharacterized LOC132342617 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene citron rho-interacting serine/threonine kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables acyl-CoA dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    acyl-CoA dehydrogenase family member 10
    Names
    acyl-Coenzyme A dehydrogenase family, member 10
    NP_001179221.1
    XP_010812203.1
    XP_010812204.1
    XP_010812205.1
    XP_010812206.1
    XP_010812207.1
    XP_024832940.1
    XP_059731944.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192292.1 → NP_001179221.1  acyl-CoA dehydrogenase family member 10

      See identical proteins and their annotated locations for NP_001179221.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000017
      UniProtKB/TrEMBL
      A0AAA9TJ26, E1BGS2
      Related
      ENSBTAP00000011801.5, ENSBTAT00000011801.6
      Conserved Domains (5) summary
      PLN02876
      Location:257 → 1052
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:286 → 536
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      TIGR02247
      Location:42 → 247
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl09933
      Location:658 → 1052
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:46 → 236
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55400988..55450323
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010813903.3 → XP_010812205.1  acyl-CoA dehydrogenase family member 10 isoform X1

      See identical proteins and their annotated locations for XP_010812205.1

      UniProtKB/TrEMBL
      A0AAA9TJ26, E1BGS2
      Conserved Domains (5) summary
      PLN02876
      Location:257 → 1052
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:286 → 536
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      TIGR02247
      Location:42 → 247
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl09933
      Location:658 → 1052
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:46 → 236
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. XM_010813904.3 → XP_010812206.1  acyl-CoA dehydrogenase family member 10 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MFK8, A0AAA9TJ26
      Related
      ENSBTAP00000067742.2, ENSBTAT00000080955.2
      Conserved Domains (5) summary
      PLN02876
      Location:257 → 999
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:286 → 536
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      TIGR02247
      Location:42 → 247
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl09933
      Location:658 → 999
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:46 → 236
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    3. XM_024977172.2 → XP_024832940.1  acyl-CoA dehydrogenase family member 10 isoform X5

      Conserved Domains (2) summary
      TIGR02247
      Location:42 → 58
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl25414
      Location:60 → 831
      Acyl-CoA_dh_M; Acyl-CoA dehydrogenase, middle domain

    4. XM_010813901.4 → XP_010812203.1  acyl-CoA dehydrogenase family member 10 isoform X1

      See identical proteins and their annotated locations for XP_010812203.1

      UniProtKB/TrEMBL
      A0AAA9TJ26, E1BGS2
      Conserved Domains (5) summary
      PLN02876
      Location:257 → 1052
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:286 → 536
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      TIGR02247
      Location:42 → 247
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl09933
      Location:658 → 1052
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:46 → 236
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    5. XM_010813902.4 → XP_010812204.1  acyl-CoA dehydrogenase family member 10 isoform X1

      See identical proteins and their annotated locations for XP_010812204.1

      UniProtKB/TrEMBL
      A0AAA9TJ26, E1BGS2
      Conserved Domains (5) summary
      PLN02876
      Location:257 → 1052
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:286 → 536
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      TIGR02247
      Location:42 → 247
      HAD-1A3-hyp; epoxide hydrolase N-terminal domain-like phosphatase
      cl09933
      Location:658 → 1052
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:46 → 236
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    6. XM_059875961.1 → XP_059731944.1  acyl-CoA dehydrogenase family member 10 isoform X3

    7. XM_010813905.4 → XP_010812207.1  acyl-CoA dehydrogenase family member 10 isoform X4

      Conserved Domains (4) summary
      PLN02876
      Location:65 → 860
      PLN02876; acyl-CoA dehydrogenase
      cd05154
      Location:94 → 344
      ACAD10_11_N-like; N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins
      cl09933
      Location:466 → 860
      ACAD; Acyl-CoA dehydrogenase
      cl21460
      Location:1 → 44
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials