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    AOPEP aminopeptidase O (putative) [ Bos taurus (domestic cattle) ]

    Gene ID: 531757, updated on 27-Dec-2024

    Summary

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    Gene symbol
    AOPEP
    Gene description
    aminopeptidase O (putative)
    See related
    Ensembl:ENSBTAG00000000699
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C8H9orf3
    Orthologs
    human mouse all
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    Genomic context

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    See AOPEP in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (81197356..81619574)

    Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132345986 Neighboring gene fructose-bisphosphatase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene microRNA mir-2475 Neighboring gene microRNA mir-24-1 Neighboring gene microRNA mir-23b Neighboring gene microRNA mir-27b Neighboring gene FA complementation group C Neighboring gene uncharacterized LOC132345987 Neighboring gene patched 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aminopeptidase O
    Names
    chromosome 8 C9orf3 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206980.2 → NP_001193909.2  aminopeptidase O

      Status: VALIDATED

      Source sequence(s)
      DAAA02023989, DAAA02023990, DAAA02023992, DAAA02023993
      UniProtKB/TrEMBL
      G3N085
      Related
      ENSBTAP00000055242.3, ENSBTAT00000065565.3
      Conserved Domains (2) summary
      cd09595
      Location:179 → 625
      M1; Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase
      pfam09127
      Location:714 → 811
      Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      81197356..81619574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059889131.1 → XP_059745114.1  aminopeptidase O isoform X2

      UniProtKB/TrEMBL
      G3N085

    2. XM_059889130.1 → XP_059745113.1  aminopeptidase O isoform X1

      UniProtKB/TrEMBL
      E1BA70, G3N085

    3. XM_059889129.1 → XP_059745112.1  aminopeptidase O isoform X1

      UniProtKB/TrEMBL
      E1BA70, G3N085
      Related
      ENSBTAP00000000938.6, ENSBTAT00000000938.6

    4. XM_024995797.2 → XP_024851565.1  aminopeptidase O isoform X3

      UniProtKB/TrEMBL
      G3N085
      Conserved Domains (2) summary
      cd09595
      Location:179 → 626
      M1; Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase
      pfam09127
      Location:700 → 773
      Leuk-A4-hydro_C; Leukotriene A4 hydrolase, C-terminal

    5. XM_059889132.1 → XP_059745115.1  aminopeptidase O isoform X4

      UniProtKB/TrEMBL
      A0AAA9T144, G3N085
      Related
      ENSBTAP00000089373.1, ENSBTAT00000102365.1

    6. XM_059889133.1 → XP_059745116.1  aminopeptidase O isoform X5

    7. XM_059889134.1 → XP_059745117.1  aminopeptidase O isoform X6

    Nucleotide Protein Strain
    Heading Accession and Version

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