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    ATP23 ATP23 metallopeptidase and ATP synthase assembly factor homolog [ Bos taurus (domestic cattle) ]

    Gene ID: 514014, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ATP23provided by VGNC
    Official Full Name
    ATP23 metallopeptidase and ATP synthase assembly factor homologprovided by VGNC
    Primary source
    VGNC:VGNC:26289
    See related
    Ensembl:ENSBTAG00000017543
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ATP23 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (55516050..55539039, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132345296 Neighboring gene thymidylate synthase-like Neighboring gene uncharacterized LOC112446704 Neighboring gene microRNA mir-26a-2 Neighboring gene CTD small phosphatase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial protein processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial proton-transporting ATP synthase complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mitochondrial inner membrane protease ATP23 homolog
    NP_001192419.1
    XP_024847437.1
    XP_024847438.1
    XP_024847439.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205490.1 → NP_001192419.1  mitochondrial inner membrane protease ATP23 homolog

      See identical proteins and their annotated locations for NP_001192419.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000005
      UniProtKB/TrEMBL
      F1MY08
      Related
      ENSBTAP00000042356.4, ENSBTAT00000044911.4
      Conserved Domains (1) summary
      pfam09768
      Location:50 → 220
      Peptidase_M76; Peptidase M76 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55516050..55539039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024991671.2 → XP_024847439.1  mitochondrial inner membrane protease ATP23 homolog isoform X2

      Conserved Domains (1) summary
      pfam09768
      Location:1 → 102
      Peptidase_M76; Peptidase M76 family

    2. XM_024991670.2 → XP_024847438.1  mitochondrial inner membrane protease ATP23 homolog isoform X2

      Conserved Domains (1) summary
      pfam09768
      Location:1 → 102
      Peptidase_M76; Peptidase M76 family

    3. XM_024991669.2 → XP_024847437.1  mitochondrial inner membrane protease ATP23 homolog isoform X1

      Conserved Domains (1) summary
      pfam09768
      Location:22 → 159
      Peptidase_M76; Peptidase M76 family
    Nucleotide Protein Strain
    Heading Accession and Version

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