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    DMBT1 deleted in malignant brain tumors 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 404104, updated on 1-Jan-2025

    Summary

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    Gene symbol
    DMBT1
    Gene description
    deleted in malignant brain tumors 1
    See related
    BGD:BT22909
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MUCIN
    Orthologs
    human mouse all
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    Genomic context

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    See DMBT1 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    70
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (42390383..42492218)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A1 Neighboring gene HtrA serine peptidase 1 Neighboring gene uncharacterized LOC100849037 Neighboring gene microRNA mir-10225b Neighboring gene mucin-13 Neighboring gene carbohydrate-binding protein AQN-1 Neighboring gene uncharacterized LOC132343972 Neighboring gene spermadhesin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Bovine gall-bladder mucin contains two distinct tandem repeating sequences: evidence for scavenger receptor cysteine-rich repeats. Nunes DP, et al. Biochem J, 1995 Aug 15. PMID 7646470, Free PMC Article
    2. Deleted in Malignant Brain Tumors 1 is a versatile mucin-like molecule likely to play a differential role in digestive tract cancer. Mollenhauer J, et al. Cancer Res, 2001 Dec 15. PMID 11751412
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in zymogen activation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deleted in malignant brain tumors 1 protein; scavenger receptor cysteine-rich domain-containing protein DMBT1
    Names
    gall-bladder mucin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      42390383..42492218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882093.1 → XP_059738076.1  scavenger receptor cysteine-rich domain-containing protein DMBT1

    Nucleotide Protein Strain
    Heading Accession and Version

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