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    AGFG1 ArfGAP with FG repeats 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 536149, updated on 1-Jan-2025

    Summary

    Official Symbol
    AGFG1provided by VGNC
    Official Full Name
    ArfGAP with FG repeats 1provided by VGNC
    Primary source
    VGNC:VGNC:25725
    See related
    BGD:BT16624; Ensembl:ENSBTAG00000021323
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    HRB
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See AGFG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (115630066..115704748)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene mitochondrial fission factor Neighboring gene transmembrane 4 L six family member 20 Neighboring gene antifreeze protein Maxi-like Neighboring gene small cysteine and glycine repeat-containing protein 4-like Neighboring gene small cysteine and glycine repeat-containing protein 4-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Markers

    Clone Names

    • MGC128795

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in acrosome assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spermatid nucleus differentiation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    arf-GAP domain and FG repeat-containing protein 1
    Names
    HIV-1 Rev binding protein
    HIV-1 Rev-binding protein homolog
    arf-GAP domain and FG repeats-containing protein 1
    nucleoporin-like protein RIP

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038171.2NP_001033260.1  arf-GAP domain and FG repeat-containing protein 1

      Status: PROVISIONAL

      Source sequence(s)
      BC111120
      UniProtKB/Swiss-Prot
      Q2TA45
      UniProtKB/TrEMBL
      A0A3Q1N1H3
      Related
      ENSBTAP00000028427.6, ENSBTAT00000028427.7
      Conserved Domains (1) summary
      smart00105
      Location:14135
      ArfGap; Putative GTP-ase activating proteins for the small GTPase, ARF

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      115630066..115704748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875612.1XP_059731595.1  arf-GAP domain and FG repeat-containing protein 1 isoform X1

    2. XM_059875617.1XP_059731600.1  arf-GAP domain and FG repeat-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1N1H3, A0A3Q1NF13
      Related
      ENSBTAP00000070272.2, ENSBTAT00000075219.2
    3. XM_059875623.1XP_059731606.1  arf-GAP domain and FG repeat-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1N1H3
      Related
      ENSBTAP00000062899.2, ENSBTAT00000071637.2
    4. XM_059875622.1XP_059731605.1  arf-GAP domain and FG repeat-containing protein 1 isoform X3

    5. XM_005202957.5XP_005203014.4  arf-GAP domain and FG repeat-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1N1H3
    6. XM_005202959.5XP_005203016.4  arf-GAP domain and FG repeat-containing protein 1 isoform X6

    7. XM_005202961.5XP_005203018.4  arf-GAP domain and FG repeat-containing protein 1 isoform X7