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    KXD1 KxDL motif containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 534253, updated on 27-Dec-2024

    Summary

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    Official Symbol
    KXD1provided by VGNC
    Official Full Name
    KxDL motif containing 1provided by VGNC
    Primary source
    VGNC:VGNC:30757
    See related
    BGD:BT29508; Ensembl:ENSBTAG00000010545
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C19orf50; C7H19orf50
    Orthologs
    human mouse all
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    Genomic context

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    See KXD1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (4607355..4614831, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447322 Neighboring gene required for excision 1-B domain containing Neighboring gene ubiquitin A-52 residue ribosomal protein fusion product 1 Neighboring gene FKBP prolyl isomerase 8 Neighboring gene elongation factor for RNA polymerase II

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC127866

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lysosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BORC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kxDL motif-containing protein 1
    Names
    UPF0459 protein C19orf50 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034605.2 → NP_001029777.1  kxDL motif-containing protein 1

      See identical proteins and their annotated locations for NP_001029777.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102692
      UniProtKB/Swiss-Prot
      Q3SZV2
      UniProtKB/TrEMBL
      A0AAA9TUE3
      Conserved Domains (1) summary
      pfam10241
      Location:14 → 93
      KxDL; Uncharacterized conserved protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      4607355..4614831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059888283.1 → XP_059744266.1  kxDL motif-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TUE3
      Related
      ENSBTAP00000013943.6, ENSBTAT00000013943.7

    2. XM_059888281.1 → XP_059744264.1  kxDL motif-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TUE3

    3. XM_059888282.1 → XP_059744265.1  kxDL motif-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TUE3
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZV2.1 GenPept UniProtKB/Swiss-Prot:Q3SZV2

    Gene LinkOut

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