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    NUP188 nucleoporin 188 [ Bos taurus (domestic cattle) ]

    Gene ID: 504307, updated on 27-Dec-2024

    Summary

    Official Symbol
    NUP188provided by VGNC
    Official Full Name
    nucleoporin 188provided by VGNC
    Primary source
    VGNC:VGNC:32354
    See related
    BGD:BT18254; Ensembl:ENSBTAG00000010613
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See NUP188 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    44
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (99445812..99489021)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene phytanoyl-CoA dioxygenase domain containing 1 Neighboring gene dolichol kinase Neighboring gene SH3 domain containing GRB2 like, endophilin B2 Neighboring gene mitoguardin 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Markers

    Clone Names

    • KIAA0169, MGC157277

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in RNA export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of nuclear pore inner ring IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    nucleoporin NUP188
    Names
    nucleoporin 188kDa

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101838.2NP_001095308.1  nucleoporin NUP188

      See identical proteins and their annotated locations for NP_001095308.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148148
      UniProtKB/TrEMBL
      A0AAA9RVU1, A6QM02
      Conserved Domains (1) summary
      pfam10487
      Location:31941
      Nup188; Nucleoporin subcomplex protein binding to Pom34

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      99445812..99489021
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059891062.1XP_059747045.1  nucleoporin NUP188 isoform X3

      UniProtKB/TrEMBL
      A0AAA9RVU1
    2. XM_005213192.5XP_005213249.1  nucleoporin NUP188 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RVU1
      Related
      ENSBTAP00000076468.1, ENSBTAT00000098178.1
      Conserved Domains (1) summary
      pfam10487
      Location:31941
      Nup188; Nucleoporin subcomplex protein binding to Pom34
    3. XM_059891061.1XP_059747044.1  nucleoporin NUP188 isoform X2

      UniProtKB/TrEMBL
      A0AAA9RVU1, F1N6B6
      Related
      ENSBTAP00000014030.7, ENSBTAT00000014030.7