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    OS9 OS9 endoplasmic reticulum lectin [ Bos taurus (domestic cattle) ]

    Gene ID: 504832, updated on 27-Dec-2024

    Summary

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    Official Symbol
    OS9provided by VGNC
    Official Full Name
    OS9 endoplasmic reticulum lectinprovided by VGNC
    Primary source
    VGNC:VGNC:32455
    See related
    BGD:BT19477; Ensembl:ENSBTAG00000007152
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See OS9 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (55744825..55779069, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 31 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 Neighboring gene small VCP/p97-interacting protein-like Neighboring gene beta-1,4-N-acetyl-galactosaminyltransferase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC129074

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum unfolded protein response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde protein transport, ER to cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein OS-9
    Names
    amplified in osteosarcoma
    osteosarcoma amplified 9, endoplasmic reticulum associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034225.1 → NP_001029397.1  protein OS-9 precursor

      See identical proteins and their annotated locations for NP_001029397.1

      Status: PROVISIONAL

      Source sequence(s)
      BC104554
      UniProtKB/Swiss-Prot
      Q3MHX6
      UniProtKB/TrEMBL
      F1MX65
      Related
      ENSBTAP00000009410.5, ENSBTAT00000009410.5
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55744825..55779069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206519.5 → XP_005206576.1  protein OS-9 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SNQ8
      Related
      ENSBTAP00000086992.1, ENSBTAT00000105734.1
      Conserved Domains (2) summary
      pfam07915
      Location:110 → 181
      PRKCSH; Glucosidase II beta subunit-like protein
      cl06793
      Location:175 → 236
      PRKCSH; Glucosidase II beta subunit-like protein
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3MHX6.1 GenPept UniProtKB/Swiss-Prot:Q3MHX6

    Gene LinkOut

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    Research Materials