U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MRPL23 mitochondrial ribosomal protein L23 [ Bos taurus (domestic cattle) ]

    Gene ID: 508825, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    MRPL23
    Gene description
    mitochondrial ribosomal protein L23
    See related
    BGD:BT13149; Ensembl:ENSBTAG00000000103
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MRPL23 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (49542745..49549261, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101902537 Neighboring gene H19, imprinted maternally expressed transcript (non-protein coding) Neighboring gene uncharacterized LOC101902793 Neighboring gene troponin T3, fast skeletal type Neighboring gene proline rich 33 Neighboring gene lymphocyte specific protein 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    large ribosomal subunit protein uL23m

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077884.2 → NP_001071352.1  large ribosomal subunit protein uL23m

      See identical proteins and their annotated locations for NP_001071352.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108192
      UniProtKB/TrEMBL
      F1MG75, Q32PA7
      Related
      ENSBTAP00000000112.5, ENSBTAT00000000112.6
      Conserved Domains (1) summary
      pfam00276
      Location:2 → 58
      Ribosomal_L23; Ribosomal protein L23

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49542745..49549261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024987048.2 → XP_024842816.1  large ribosomal subunit protein uL23m isoform X2

      UniProtKB/TrEMBL
      A0AAA9SXQ2
      Related
      ENSBTAP00000088852.1, ENSBTAT00000088999.1
      Conserved Domains (1) summary
      pfam00276
      Location:42 → 105
      Ribosomal_L23; Ribosomal protein L23

    2. XM_059882825.1 → XP_059738808.1  large ribosomal subunit protein uL23m isoform X1

      UniProtKB/TrEMBL
      F1MG75, Q32PA7

    3. XM_059882824.1 → XP_059738807.1  large ribosomal subunit protein uL23m isoform X1

      UniProtKB/TrEMBL
      F1MG75, Q32PA7
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials