U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PEX11G peroxisomal biogenesis factor 11 gamma [ Bos taurus (domestic cattle) ]

    Gene ID: 506518, updated on 29-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    PEX11Gprovided by VGNC
    Official Full Name
    peroxisomal biogenesis factor 11 gammaprovided by VGNC
    Primary source
    VGNC:VGNC:32753
    See related
    BGD:BT19832; Ensembl:ENSBTAG00000018894
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PEX11G in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (16347584..16372485, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene insulin receptor Neighboring gene uncharacterized LOC112447347 Neighboring gene Rho/Rac guanine nucleotide exchange factor 18 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene testis expressed 45 Neighboring gene zinc finger protein 358 Neighboring gene mucolipin TRP cation channel 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in peroxisome fission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    peroxisomal membrane protein 11C

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193256.1 → NP_001180185.1  peroxisomal membrane protein 11C

      See identical proteins and their annotated locations for NP_001180185.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000007
      UniProtKB/TrEMBL
      F1MTQ5
      Related
      ENSBTAP00070022838.1, ENSBTAT00070038546.1
      Conserved Domains (1) summary
      pfam05648
      Location:4 → 214
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16347584..16372485 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010806805.4 → XP_010805107.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805107.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    2. XM_015472001.3 → XP_015327487.1  peroxisomal membrane protein 11C isoform X1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    3. XM_024993967.2 → XP_024849735.1  peroxisomal membrane protein 11C isoform X1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    4. XM_059888008.1 → XP_059743991.1  peroxisomal membrane protein 11C isoform X1

    5. XM_010806801.4 → XP_010805103.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805103.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    6. XM_010806800.3 → XP_010805102.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805102.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    7. XM_010806804.4 → XP_010805106.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805106.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    8. XM_059888007.1 → XP_059743990.1  peroxisomal membrane protein 11C isoform X1

    9. XM_010806799.4 → XP_010805101.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805101.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    10. XM_010806798.4 → XP_010805100.1  peroxisomal membrane protein 11C isoform X1

      See identical proteins and their annotated locations for XP_010805100.1

      Conserved Domains (1) summary
      pfam05648
      Location:1 → 144
      PEX11; Peroxisomal biogenesis factor 11 (PEX11)

    11. XM_059888006.1 → XP_059743989.1  peroxisomal membrane protein 11C isoform X1

    12. XM_059888005.1 → XP_059743988.1  peroxisomal membrane protein 11C isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials