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    IRF7 interferon regulatory factor 7 [ Bos taurus (domestic cattle) ]

    Gene ID: 100125591, updated on 30-Jan-2025

    Summary

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    Official Symbol
    IRF7provided by VGNC
    Official Full Name
    interferon regulatory factor 7provided by VGNC
    Primary source
    VGNC:VGNC:30278
    See related
    EnsemblRapid:ENSBTAG00070037034
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See IRF7 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (50695346..50698451)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene secretin Neighboring gene cadherin related family member 5 Neighboring gene PHD and ring finger domains 1 Neighboring gene skin secretory protein xP2 Neighboring gene microRNA mir-210

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC179450

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in immune system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    interferon regulatory factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105040.1 → NP_001098510.1  interferon regulatory factor 7

      Status: PROVISIONAL

      Source sequence(s)
      BC151518
      UniProtKB/TrEMBL
      A0A2H4GTE4, A8E4Q6
      Related
      ENSBTAP00070050124.1, ENSBTAT00070082900.1
      Conserved Domains (2) summary
      pfam00605
      Location:13 → 123
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:262 → 439
      IRF-3; Interferon-regulatory factor 3

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      50695346..50698451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882738.1 → XP_059738721.1  interferon regulatory factor 7 isoform X1

      UniProtKB/TrEMBL
      A0A2H4GTE4

    2. XM_059882739.1 → XP_059738722.1  interferon regulatory factor 7 isoform X2

      UniProtKB/TrEMBL
      A0A2H4GTE4

    3. XM_059882740.1 → XP_059738723.1  interferon regulatory factor 7 isoform X3

      UniProtKB/TrEMBL
      A0A2H4GTE4
    Nucleotide Protein Strain
    Heading Accession and Version

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