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    HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 [ Bos taurus (domestic cattle) ]

    Gene ID: 540311, updated on 1-Jan-2025

    Summary

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    Official Symbol
    HNRNPA0provided by VGNC
    Official Full Name
    heterogeneous nuclear ribonucleoprotein A0provided by VGNC
    Primary source
    VGNC:VGNC:52238
    See related
    BGD:BT17209; Ensembl:ENSBTAG00000002796
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    HNRPA0
    Orthologs
    human mouse all
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    Genomic context

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    See HNRNPA0 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (49215876..49218644, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 3 Neighboring gene microRNA mir-874 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene myotilin Neighboring gene polycystin 2 like 2, transient receptor potential cation channel Neighboring gene family with sequence similarity 13 member B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein A0

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49215876..49218644 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002689195.4 → XP_002689241.1  heterogeneous nuclear ribonucleoprotein A0

      See identical proteins and their annotated locations for XP_002689241.1

      UniProtKB/TrEMBL
      A0AAA9STL7, A0AAA9T372
      Related
      ENSBTAP00000090137.1, ENSBTAT00000113097.1
      Conserved Domains (3) summary
      cd12326
      Location:5 → 83
      RRM1_hnRNPA0; RNA recognition motif 1 found in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
      cd12579
      Location:99 → 178
      RRM2_hnRNPA0; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
      pfam11627
      Location:250 → 269
      HnRNPA1; Nuclear factor hnRNPA1
    Nucleotide Protein Strain
    Heading Accession and Version

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