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    NVL nuclear VCP like [ Bos taurus (domestic cattle) ]

    Gene ID: 532708, updated on 27-Dec-2024

    Summary

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    Official Symbol
    NVLprovided by VGNC
    Official Full Name
    nuclear VCP likeprovided by VGNC
    Primary source
    VGNC:VGNC:32372
    See related
    Ensembl:ENSBTAG00000006718
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See NVL in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (27322494..27502560, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene calpain 2 Neighboring gene tumor protein p53 binding protein 2 Neighboring gene F-box protein 28 Neighboring gene large ribosomal subunit protein P1-like Neighboring gene delta 4-desaturase, sphingolipid 1 Neighboring gene uncharacterized LOC101905510 Neighboring gene cornichon family AMPA receptor auxiliary protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC166259

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables preribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear valosin-containing protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      27322494..27502560 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875668.1 → XP_059731651.1  nuclear valosin-containing protein-like isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MRX3

    2. XM_059875672.1 → XP_059731655.1  nuclear valosin-containing protein-like isoform X7

      UniProtKB/TrEMBL
      A6QNN6

    3. XM_059875671.1 → XP_059731654.1  nuclear valosin-containing protein-like isoform X7

      UniProtKB/TrEMBL
      A6QNN6

    4. XM_059875667.1 → XP_059731650.1  nuclear valosin-containing protein-like isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MRX3

    5. XM_059875670.1 → XP_059731653.1  nuclear valosin-containing protein-like isoform X6

      UniProtKB/TrEMBL
      A6QNN6

    6. XM_024976689.2 → XP_024832457.1  nuclear valosin-containing protein-like isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MRX3
      Conserved Domains (2) summary
      pfam16725
      Location:2 → 71
      Nucleolin_bd; Nucleolin binding domain
      cl27568
      Location:255 → 848
      TIP49; TIP49 C-terminus

    7. XM_059875669.1 → XP_059731652.1  nuclear valosin-containing protein-like isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MRX3, F1MIM8
      Related
      ENSBTAP00000044679.5, ENSBTAT00000047473.5

    8. XM_024976690.2 → XP_024832458.1  nuclear valosin-containing protein-like isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MAE6, A0A3Q1MRX3
      Related
      ENSBTAP00000070984.2, ENSBTAT00000070132.2
      Conserved Domains (2) summary
      pfam16725
      Location:2 → 71
      Nucleolin_bd; Nucleolin binding domain
      cl27568
      Location:255 → 860
      TIP49; TIP49 C-terminus

    9. XM_059875673.1 → XP_059731656.1  nuclear valosin-containing protein-like isoform X8

      UniProtKB/TrEMBL
      A0A3Q1NJJ8
    Nucleotide Protein Strain
    Heading Accession and Version

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