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    CCDC106 coiled-coil domain containing 106 [ Bos taurus (domestic cattle) ]

    Gene ID: 618485, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CCDC106provided by VGNC
    Official Full Name
    coiled-coil domain containing 106provided by VGNC
    Primary source
    VGNC:VGNC:26831
    See related
    BGD:BT24405; Ensembl:ENSBTAG00000011517
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC106 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (61893728..61897469, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene epsin 1 Neighboring gene U2 small nuclear RNA auxiliary factor 2 Neighboring gene zinc finger protein 581 Neighboring gene zinc finger protein 580

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139153

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 106

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080334.1 → NP_001073803.1  coiled-coil domain-containing protein 106

      See identical proteins and their annotated locations for NP_001073803.1

      Status: PROVISIONAL

      Source sequence(s)
      BC116140
      UniProtKB/Swiss-Prot
      Q1LZ89
      UniProtKB/TrEMBL
      A0AAA9RZB2
      Related
      ENSBTAP00000015303.3, ENSBTAT00000015303.5
      Conserved Domains (1) summary
      pfam15794
      Location:54 → 274
      CCDC106; Coiled-coil domain-containing protein 106

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      61893728..61897469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876965.1 → XP_059732948.1  coiled-coil domain-containing protein 106 isoform X1

      UniProtKB/Swiss-Prot
      Q1LZ89
      UniProtKB/TrEMBL
      A0AAA9RZB2

    2. XM_059876966.1 → XP_059732949.1  coiled-coil domain-containing protein 106 isoform X1

      UniProtKB/Swiss-Prot
      Q1LZ89
      UniProtKB/TrEMBL
      A0AAA9RZB2

    3. XM_059876967.1 → XP_059732950.1  coiled-coil domain-containing protein 106 isoform X2

      UniProtKB/TrEMBL
      A0AAA9RZB2

    4. XM_059876964.1 → XP_059732947.1  coiled-coil domain-containing protein 106 isoform X1

      UniProtKB/Swiss-Prot
      Q1LZ89
      UniProtKB/TrEMBL
      A0AAA9RZB2

    5. XM_059876968.1 → XP_059732951.1  coiled-coil domain-containing protein 106 isoform X3

      UniProtKB/TrEMBL
      A0AAA9RZB2

    6. XM_059876969.1 → XP_059732952.1  coiled-coil domain-containing protein 106 isoform X3

      UniProtKB/TrEMBL
      A0AAA9RZB2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1LZ89.1 GenPept UniProtKB/Swiss-Prot:Q1LZ89

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