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    EVC EvC ciliary complex subunit 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 282874, updated on 29-Jan-2025

    Summary

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    Official Symbol
    EVCprovided by VGNC
    Official Full Name
    EvC ciliary complex subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:28634
    See related
    BGD:BT13713; Ensembl:ENSBTAG00000004287
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See EVC in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (103392469..103497403, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene chromosome 6 C4orf50 homolog Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC132345544 Neighboring gene collapsin response mediator protein 1 Neighboring gene EvC ciliary complex subunit 2 Neighboring gene U6 spliceosomal RNA Neighboring gene transfer RNA glycine (anticodon CCC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in smoothened signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of plasma membrane protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    evC complex member EVC
    Names
    Ellis van Creveld syndrome

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174747.2 → NP_777172.1  evC complex member EVC

      See identical proteins and their annotated locations for NP_777172.1

      Status: PROVISIONAL

      Source sequence(s)
      AY028586
      UniProtKB/TrEMBL
      A0AAA9S1L1, Q9BDH1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      103392469..103497403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005208179.5 → XP_005208236.2  evC complex member EVC isoform X1

      UniProtKB/TrEMBL
      A0AAA9S1L1

    2. XM_059887350.1 → XP_059743333.1  evC complex member EVC isoform X4

      UniProtKB/TrEMBL
      A0A3Q1ME03

    3. XM_015471697.3 → XP_015327183.2  evC complex member EVC isoform X3

      UniProtKB/TrEMBL
      A0AAA9S1L1

    4. XM_005208178.5 → XP_005208235.2  evC complex member EVC isoform X2

      UniProtKB/TrEMBL
      A0AAA9S1L1, F1MQQ1
      Related
      ENSBTAP00070035062.1, ENSBTAT00070059097.1

    5. XM_059887351.1 → XP_059743334.1  evC complex member EVC isoform X5

    RNA

    1. XR_009494752.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials