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    UNK unk zinc finger [ Bos taurus (domestic cattle) ]

    Gene ID: 510090, updated on 29-Jan-2025

    Summary

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    Official Symbol
    UNKprovided by VGNC
    Official Full Name
    unk zinc fingerprovided by VGNC
    Primary source
    VGNC:VGNC:36678
    See related
    BGD:BT17818; Ensembl:ENSBTAG00000016287
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See UNK in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (55785613..55817854, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 47 Neighboring gene WW domain binding protein 2 Neighboring gene unc-13 homolog D Neighboring gene uncharacterized LOC132343121 Neighboring gene uncharacterized LOC112442716 Neighboring gene H3.3 histone B Neighboring gene galactokinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC143291

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein unkempt homolog
    Names
    unkempt family zinc finger
    unkempt homolog
    zinc finger CCCH-type domain containing 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080253.1 → NP_001073722.1  RING finger protein unkempt homolog

      See identical proteins and their annotated locations for NP_001073722.1

      Status: PROVISIONAL

      Source sequence(s)
      BC126633
      UniProtKB/TrEMBL
      A0A3Q1LZ16, A1A4K6, F6QHJ6
      Related
      ENSBTAP00070014771.1, ENSBTAT00070024896.1
      Conserved Domains (4) summary
      COG5063
      Location:124 → 318
      CTH1; CCCH-type Zn-finger protein [General function prediction only]
      pfam00642
      Location:294 → 320
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam13920
      Location:765 → 801
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
      cl23943
      Location:635 → 726
      PCRF; PCRF domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55785613..55817854 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024979892.2 → XP_024835660.1  RING finger protein unkempt homolog isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LZ16
      Conserved Domains (3) summary
      pfam00642
      Location:294 → 320
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      cd16771
      Location:746 → 779
      RING-HC_UNK; RING finger, HC subclass, found in RING finger protein unkempt (UNK) and similar proteins
      cl28233
      Location:598 → 690
      HsdR; Type I site-specific restriction endonuclease, part of a restriction-modification system [Defense mechanisms]

    2. XM_059877892.1 → XP_059733875.1  RING finger protein unkempt homolog isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LZ16
    Nucleotide Protein Strain
    Heading Accession and Version

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