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    MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 508306, updated on 27-Dec-2024

    Summary

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    Official Symbol
    MICAL1provided by VGNC
    Official Full Name
    microtubule associated monooxygenase, calponin and LIM domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:31457
    See related
    BGD:BT27005; Ensembl:ENSBTAG00000008147
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MICAL-1
    Orthologs
    human mouse all
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    Genomic context

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    See MICAL1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (40699386..40710696)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene adenylate kinase 9 Neighboring gene zinc finger and BTB domain containing 24 Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene peptidylprolyl isomerase like 6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC143300

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    [F-actin]-monooxygenase MICAL1; F-actin-monooxygenase MICAL1
    Names
    [F-actin]-methionine sulfoxide oxidase MICAL1
    microtubule associated monoxygenase, calponin and LIM domain containing 1
    molecule interacting with CasL protein 1
    protein-methionine sulfoxide oxidase MICAL1
    NP_001075051.1
    XP_024852247.1
    XP_024852248.1
    XP_024852249.1
    XP_059745600.1
    XP_059745601.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081582.1 → NP_001075051.1  [F-actin]-monooxygenase MICAL1

      See identical proteins and their annotated locations for NP_001075051.1

      Status: PROVISIONAL

      Source sequence(s)
      BC133298
      UniProtKB/TrEMBL
      A0A3Q1M3N2
      Related
      ENSBTAP00000064388.2, ENSBTAT00000083047.2
      Conserved Domains (4) summary
      cd09358
      Location:697 → 750
      LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
      pfam00307
      Location:510 → 607
      CH; Calponin homology (CH) domain
      pfam12130
      Location:930 → 1063
      DUF3585; Protein of unknown function (DUF3585)
      cl21454
      Location:89 → 116
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      40699386..40710696
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024996479.2 → XP_024852247.1  F-actin-monooxygenase MICAL1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M3N2, A0AAF6YSC4
      Related
      ENSBTAP00000010714.6, ENSBTAT00000010714.7
      Conserved Domains (4) summary
      cd09358
      Location:701 → 754
      LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
      pfam00307
      Location:510 → 613
      CH; Calponin homology (CH) domain
      pfam12130
      Location:938 → 1067
      DUF3585; Protein of unknown function (DUF3585)
      cl27552
      Location:85 → 122
      FAD_binding_3; FAD binding domain

    2. XM_059889617.1 → XP_059745600.1  F-actin-monooxygenase MICAL1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M3N2, A0A3Q1M7L4
      Related
      ENSBTAP00000069824.1, ENSBTAT00000081276.2

    3. XM_024996481.2 → XP_024852249.1  F-actin-monooxygenase MICAL1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M3N2, A0AAF6YSC4
      Conserved Domains (4) summary
      cd09358
      Location:701 → 754
      LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
      pfam00307
      Location:510 → 613
      CH; Calponin homology (CH) domain
      pfam12130
      Location:938 → 1067
      DUF3585; Protein of unknown function (DUF3585)
      cl27552
      Location:85 → 122
      FAD_binding_3; FAD binding domain

    4. XM_059889618.1 → XP_059745601.1  F-actin-monooxygenase MICAL1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1M3N2

    5. XM_024996480.2 → XP_024852248.1  F-actin-monooxygenase MICAL1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1M3N2, A0AAF6YSC4
      Conserved Domains (4) summary
      cd09358
      Location:701 → 754
      LIM_Mical_like; The LIM domain of Mical (molecule interacting with CasL) like family
      pfam00307
      Location:510 → 613
      CH; Calponin homology (CH) domain
      pfam12130
      Location:938 → 1067
      DUF3585; Protein of unknown function (DUF3585)
      cl27552
      Location:85 → 122
      FAD_binding_3; FAD binding domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F1MH07.1 GenPept UniProtKB/Swiss-Prot:F1MH07

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