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    MRPL52 mitochondrial ribosomal protein L52 [ Bos taurus (domestic cattle) ]

    Gene ID: 509469, updated on 27-Dec-2024

    Summary

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    Official Symbol
    MRPL52provided by VGNC
    Official Full Name
    mitochondrial ribosomal protein L52provided by VGNC
    Primary source
    VGNC:VGNC:31647
    See related
    BGD:BT17574; Ensembl:ENSBTAG00000014822
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MRPL52 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (21979455..21984375, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 23 Neighboring gene LDL receptor related protein 10 Neighboring gene matrix metallopeptidase 14 Neighboring gene solute carrier family 7 member 7 Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene OXA1L mitochondrial inner membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. The large subunit of the mammalian mitochondrial ribosome. Analysis of the complement of ribosomal proteins present. Koc EC, et al. J Biol Chem, 2001 Nov 23. PMID 11551941
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein mL52
    Names
    39S ribosomal protein L52, mitochondrial
    L52mt
    MRP-L52

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001110180.2 → NP_001103650.1  large ribosomal subunit protein mL52 precursor

      See identical proteins and their annotated locations for NP_001103650.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102378
      UniProtKB/Swiss-Prot
      A8YXY0, P0C2B7
      Conserved Domains (1) summary
      TIGR01299
      Location:42 → 93
      synapt_SV2; synaptic vesicle protein SV2

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      21979455..21984375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010808901.4 → XP_010807203.1  large ribosomal subunit protein mL52 isoform X3

      Conserved Domains (1) summary
      TIGR01299
      Location:36 → 87
      synapt_SV2; synaptic vesicle protein SV2

    2. XM_010808900.4 → XP_010807202.1  large ribosomal subunit protein mL52 isoform X2

      Conserved Domains (1) summary
      TIGR01299
      Location:37 → 88
      synapt_SV2; synaptic vesicle protein SV2

    3. XM_005211291.5 → XP_005211348.2  large ribosomal subunit protein mL52 isoform X1

      See identical proteins and their annotated locations for XP_005211348.2

      Conserved Domains (1) summary
      cl21454
      Location:3 → 47
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    4. XM_015473016.3 → XP_015328502.2  large ribosomal subunit protein mL52 isoform X4

    5. XM_005211292.5 → XP_005211349.3  large ribosomal subunit protein mL52 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1LP84
      Related
      ENSBTAP00000058815.2, ENSBTAT00000072916.2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0C2B7.1 GenPept UniProtKB/Swiss-Prot:P0C2B7

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