U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CCL25 C-C motif chemokine ligand 25 [ Bos taurus (domestic cattle) ]

    Gene ID: 615986, updated on 1-Jan-2025

    Summary

    Official Symbol
    CCL25provided by VGNC
    Official Full Name
    C-C motif chemokine ligand 25provided by VGNC
    Primary source
    VGNC:VGNC:26951
    See related
    BGD:BT29669; Ensembl:ENSBTAG00000005581
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CCL25 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (16752365..16779698)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-10178 Neighboring gene ELAV like RNA binding protein 1 Neighboring gene fibrillin 3 Neighboring gene transfer RNA arginine (anticodon CCU)

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Clone Names

    • MGC140392

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemokine activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    C-C motif chemokine 25
    Names
    small inducible cytokine A25

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046569.2NP_001040034.2  C-C motif chemokine 25 precursor

      See identical proteins and their annotated locations for NP_001040034.2

      Status: PROVISIONAL

      Source sequence(s)
      BC118172
      UniProtKB/TrEMBL
      A0AAA9S3K9, Q148L4
      Conserved Domains (1) summary
      pfam00048
      Location:2889
      IL8; Small cytokines (intecrine/chemokine), interleukin-8 like

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      16752365..16779698
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059888386.1XP_059744369.1  C-C motif chemokine 25 isoform X1

      UniProtKB/TrEMBL
      A0AAA9S3K9, Q148L4
    2. XM_059888387.1XP_059744370.1  C-C motif chemokine 25 isoform X2

      UniProtKB/TrEMBL
      A0AAA9S3K9, Q1RMQ0
    3. XM_010806833.4XP_010805135.1  C-C motif chemokine 25 isoform X1

      See identical proteins and their annotated locations for XP_010805135.1

      UniProtKB/TrEMBL
      A0AAA9S3K9, Q148L4
      Conserved Domains (1) summary
      pfam00048
      Location:2889
      IL8; Small cytokines (intecrine/chemokine), interleukin-8 like
    4. XM_010806834.4XP_010805136.1  C-C motif chemokine 25 isoform X2

      See identical proteins and their annotated locations for XP_010805136.1

      UniProtKB/TrEMBL
      A0AAA9S3K9, Q1RMQ0
      Related
      ENSBTAP00000076682.1, ENSBTAT00000101961.1
      Conserved Domains (1) summary
      pfam00048
      Location:2889
      IL8; Small cytokines (intecrine/chemokine), interleukin-8 like