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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_011847.1 RefSeqGene
- Range
-
5027..168301
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001103146.3 → NP_001096616.1 GRB10-interacting GYF protein 2 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 5' UTR and lacks an exon in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Both variants 2 and 3 encode the same isoform (b).
- Source sequence(s)
-
AC016692, AK001739, BC008072, BX537885, BX538321
- Consensus CDS
-
CCDS33401.1
- UniProtKB/Swiss-Prot
- A6H8W4, B9EG55, E9PBB0, O75137, Q6Y7W6, Q7Z2Z8, Q7Z3I2, Q96HU4, Q9NV82
- UniProtKB/TrEMBL
-
I1E4Y6
- Related
- ENSP00000362664.5, ENST00000373563.9
- Conserved Domains (1) summary
-
- cd00072
Location:533 → 588
- GYF; GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins. Involved in signaling lymphocyte activity. Also present in other unrelated proteins (mainly unknown) derived from diverse eukaryotic species.
-
NM_001103147.2 → NP_001096617.1 GRB10-interacting GYF protein 2 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AC016692, BC146775, BE220828, BG527686
- Consensus CDS
-
CCDS46542.1
- UniProtKB/TrEMBL
-
I1E4Y6
- Related
- ENSP00000387170.3, ENST00000409451.7
- Conserved Domains (1) summary
-
- cd00072
Location:554 → 609
- GYF; GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins. Involved in signaling lymphocyte activity. Also present in other unrelated proteins (mainly unknown) derived from diverse eukaryotic species.
-
NM_001103148.2 → NP_001096618.1 GRB10-interacting GYF protein 2 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two alternate exons in the 5' UTR, and lacks an exon and uses an alternate splice site in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (c) is shorter than isoform a.
- Source sequence(s)
-
AC016692, BC146775, BE220828, BG527686, BX538172
- Consensus CDS
-
CCDS46543.1
- UniProtKB/TrEMBL
-
I1E4Y6
- Related
- ENSP00000387070.3, ENST00000409196.7
- Conserved Domains (1) summary
-
- cd00072
Location:527 → 582
- GYF; GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins. Involved in signaling lymphocyte activity. Also present in other unrelated proteins (mainly unknown) derived from diverse eukaryotic species.
-
NM_015575.4 → NP_056390.2 GRB10-interacting GYF protein 2 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate exon in the 5' UTR and lacks an exon in the coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Both variants 2 and 3 encode the same isoform (b).
- Source sequence(s)
-
AC016692, AY176045, BC146775, BE220828
- Consensus CDS
-
CCDS33401.1
- UniProtKB/Swiss-Prot
- A6H8W4, B9EG55, E9PBB0, O75137, Q6Y7W6, Q7Z2Z8, Q7Z3I2, Q96HU4, Q9NV82
- UniProtKB/TrEMBL
-
I1E4Y6
- Related
- ENSP00000386537.1, ENST00000409547.5
- Conserved Domains (1) summary
-
- cd00072
Location:533 → 588
- GYF; GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins. Involved in signaling lymphocyte activity. Also present in other unrelated proteins (mainly unknown) derived from diverse eukaryotic species.
RNA
-
NR_103492.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks three 5' exons, contains an alternate 5' exon, and lacks two internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC016692, AY176045, BC143352, BC146775, BE220828
-
NR_103493.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains two alternate exons in the 5' region, lacks multiple 3' exons, and contains an alternate 3' exon, compared to variant 1. This variant is represented as non-coding because it lacks almost the entire coding region found in variant 1.
- Source sequence(s)
-
BC093090, BC108691, BG527686
- Related
-
ENST00000482666.5
-
NR_103494.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) contains an alternate exon in the 5' region, lacks multiple 3' exons, and contains an alternate 3' exon, compared to variant 1. This variant is represented as non-coding because it lacks almost the entire coding region found in variant 1.
- Source sequence(s)
-
BC029456, BC108691, BG527686
- Related
-
ENST00000464805.5
-
NR_103495.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) lacks multiple 3' exons and contains an alternate 3' exon, compared to variant 1. This variant is represented as non-coding because it lacks almost the entire coding region found in variant 1.
- Source sequence(s)
-
BC108691, BG527686
- Related
-
ENST00000489328.1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
232697331..232860605
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
233184093..233347291
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)