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    Dct dopachrome tautomerase [ Mus musculus (house mouse) ]

    Gene ID: 13190, updated on 10-Dec-2024

    Summary

    Official Symbol
    Dctprovided by MGI
    Official Full Name
    dopachrome tautomeraseprovided by MGI
    Primary source
    MGI:MGI:102563
    See related
    Ensembl:ENSMUSG00000022129 AllianceGenome:MGI:102563
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DT; slt; TRP2; TRP-2; Tyrp2; slaty; Tyrp-2
    Summary
    Enables dopachrome isomerase activity. Involved in melanin biosynthetic process from tyrosine. Acts upstream of or within several processes, including melanin biosynthetic process; positive regulation of neuroblast proliferation; and ventricular zone neuroblast division. Located in cytosol and melanosome. Is expressed in several structures, including embryo ectoderm; embryo mesenchyme; integumental system; sensory organ; and skeleton. Human ortholog(s) of this gene implicated in oculocutaneous albinism. Orthologous to human DCT (dopachrome tautomerase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver adult (RPKM 7.8), CNS E14 (RPKM 2.4) and 8 other tissues See more
    Orthologs
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    Genomic context

    See Dct in Genome Data Viewer
    Location:
    14 E4; 14 61.6 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (118250202..118289658, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (118012790..118052246, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene glypican 6 Neighboring gene STARR-seq mESC enhancer starr_37631 Neighboring gene STARR-seq mESC enhancer starr_37632 Neighboring gene predicted gene, 52110 Neighboring gene microRNA 6239 Neighboring gene STARR-positive B cell enhancer ABC_E7351 Neighboring gene STARR-seq mESC enhancer starr_37634 Neighboring gene nuclear encoded tRNA pheylalanine 5 (anticodon GAA) Neighboring gene predicted gene, 31633 Neighboring gene TDP-glucose 4,6-dehydratase

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables dopachrome isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables dopachrome isomerase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables dopachrome isomerase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in developmental pigmentation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within developmental pigmentation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within melanin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in melanin biosynthetic process from tyrosine IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in melanin biosynthetic process from tyrosine IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in melanin biosynthetic process from tyrosine IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of neuroblast proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within pigmentation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of neuroblast proliferation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of neuroblast proliferation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in response to blue light ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to blue light ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in ventricular zone neuroblast division IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within ventricular zone neuroblast division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in melanosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in melanosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in melanosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    L-dopachrome tautomerase
    Names
    DOPAchrome conversion factor
    DOPAchrome isomerase
    DOPAchrome oxidoreductase
    L-dopachrome Delta-isomerase
    SLATY locus protein
    tyrosinase-related protein 2
    NP_034154.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010024.3NP_034154.2  L-dopachrome tautomerase precursor

      See identical proteins and their annotated locations for NP_034154.2

      Status: VALIDATED

      Source sequence(s)
      BC067064, BC082330, BY733265
      Consensus CDS
      CCDS27331.1
      UniProtKB/Swiss-Prot
      P29812, Q6NXI2
      UniProtKB/TrEMBL
      B2CY76
      Related
      ENSMUSP00000022725.3, ENSMUST00000022725.4
      Conserved Domains (1) summary
      pfam00264
      Location:180409
      Tyrosinase; Common central domain of tyrosinase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      118250202..118289658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)