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    Corin corin, serine peptidase [ Mus musculus (house mouse) ]

    Gene ID: 53419, updated on 9-Dec-2024

    Summary

    Official Symbol
    Corinprovided by MGI
    Official Full Name
    corin, serine peptidaseprovided by MGI
    Primary source
    MGI:MGI:1349451
    See related
    Ensembl:ENSMUSG00000005220 AllianceGenome:MGI:1349451
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lrp4
    Summary
    Enables serine-type endopeptidase activity. Involved in several processes, including peptide hormone processing; regulation of renal sodium excretion; and regulation of systemic arterial blood pressure by atrial natriuretic peptide. Located in cell surface. Is expressed in several structures, including floor plate; heart; jaw; phalanx; and skin. Human ortholog(s) of this gene implicated in familial hypertrophic cardiomyopathy; hypertension; and pre-eclampsia. Orthologous to human CORIN (corin, serine peptidase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in heart adult (RPKM 20.3), testis adult (RPKM 3.2) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Corin in Genome Data Viewer
    Location:
    5 C3.2; 5 38.44 cM
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (72457291..72661884, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (72299948..72504540, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr5:72551776-72552076 Neighboring gene STARR-positive B cell enhancer mm9_chr5:72559343-72559644 Neighboring gene STARR-positive B cell enhancer ABC_E670 Neighboring gene COMM domain containing 8 Neighboring gene STARR-seq mESC enhancer starr_13361 Neighboring gene STARR-seq mESC enhancer starr_13362 Neighboring gene STARR-seq mESC enhancer starr_13363 Neighboring gene STARR-positive B cell enhancer ABC_E10323 Neighboring gene ATPase, class V, type 10D Neighboring gene STARR-positive B cell enhancer ABC_E4761 Neighboring gene predicted gene, 25768 Neighboring gene STARR-seq mESC enhancer starr_13364 Neighboring gene synaptonemal complex central element protein 2 pseudogene Neighboring gene predicted gene, 23712 Neighboring gene STARR-seq mESC enhancer starr_13365 Neighboring gene STARR-seq mESC enhancer starr_13366 Neighboring gene nuclear transcription factor, X-box binding-like 1 Neighboring gene STARR-positive B cell enhancer mm9_chr5:72950846-72951147 Neighboring gene predicted gene, 34144

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC118735

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables endopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables serine-type endopeptidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables serine-type endopeptidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables serine-type endopeptidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in actin cytoskeleton ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    atrial natriuretic peptide-converting enzyme
    Names
    low density lipoprotein receptor-related protein 4
    low density lipoprotein-related protein 4
    pro-ANP-converting enzyme

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122756.2NP_001116228.1  atrial natriuretic peptide-converting enzyme isoform 2

      See identical proteins and their annotated locations for NP_001116228.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate 5' exon, as compared to variant 1. The resulting isoform (2) has a different N-terminus, as compared to isoform 1.
      Source sequence(s)
      AC129608, AC161529
      Consensus CDS
      CCDS51513.1
      UniProtKB/TrEMBL
      H3BLB2
      Related
      ENSMUSP00000127389.3, ENSMUST00000167460.9
      Conserved Domains (7) summary
      cd07445
      Location:136265
      CRD_corin_1; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      cd07888
      Location:456577
      CRD_corin_2; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      smart00020
      Location:8021031
      Tryp_SPc; Trypsin-like serine protease
      smart00202
      Location:692787
      SR; Scavenger receptor Cys-rich
      cd00112
      Location:657691
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:8031034
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00057
      Location:582616
      Ldl_recept_a; Low-density lipoprotein receptor domain class A
    2. NM_001421227.1NP_001408156.1  atrial natriuretic peptide-converting enzyme isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC129608, AC161529
      UniProtKB/TrEMBL
      H3BKS9
    3. NM_016869.4NP_058565.2  atrial natriuretic peptide-converting enzyme isoform 1

      See identical proteins and their annotated locations for NP_058565.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1).
      Source sequence(s)
      AC129608, AC161529
      Consensus CDS
      CCDS19330.1
      UniProtKB/Swiss-Prot
      B2RRC6, Q566K6, Q9Z319
      UniProtKB/TrEMBL
      B7ZNH6
      Related
      ENSMUSP00000005352.4, ENSMUST00000005352.10
      Conserved Domains (7) summary
      cd07445
      Location:202331
      CRD_corin_1; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      cd07888
      Location:522643
      CRD_corin_2; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      smart00020
      Location:8681097
      Tryp_SPc; Trypsin-like serine protease
      smart00202
      Location:758853
      SR; Scavenger receptor Cys-rich
      cd00112
      Location:723757
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:8691100
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00057
      Location:648682
      Ldl_recept_a; Low-density lipoprotein receptor domain class A

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      72457291..72661884 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011240755.1XP_011239057.1  atrial natriuretic peptide-converting enzyme isoform X1

      UniProtKB/TrEMBL
      H3BKS9
      Conserved Domains (6) summary
      cd07445
      Location:136264
      CRD_corin_1; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      cd07888
      Location:455576
      CRD_corin_2; One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease
      smart00202
      Location:691786
      SR; Scavenger receptor Cys-rich
      cd00112
      Location:656690
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cd00190
      Location:8021033
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00057
      Location:581615
      Ldl_recept_a; Low-density lipoprotein receptor domain class A