U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cox7a2 cytochrome c oxidase subunit 7A2 [ Mus musculus (house mouse) ]

    Gene ID: 12866, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cox7a2provided by MGI
    Official Full Name
    cytochrome c oxidase subunit 7A2provided by MGI
    Primary source
    MGI:MGI:1316715
    See related
    Ensembl:ENSMUSG00000032330 AllianceGenome:MGI:1316715
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    COX7AL; Cox7a3; CoxVIIa-L
    Summary
    Predicted to enable oxidoreductase activity. Predicted to be involved in mitochondrial respirasome assembly and regulation of oxidative phosphorylation. Located in mitochondrial inner membrane. Is expressed in several structures, including alimentary system; heart; hemolymphoid system; integumental system; and nervous system. Orthologous to several human genes including COX7A2 (cytochrome c oxidase subunit 7A2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in heart adult (RPKM 183.5), kidney adult (RPKM 165.8) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cox7a2 in Genome Data Viewer
    Location:
    9 E1; 9 43.82 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (79662523..79667135, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (79755241..79771422, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 8125 Neighboring gene STARR-seq mESC enhancer starr_24746 Neighboring gene collagen, type XII, alpha 1 Neighboring gene STARR-seq mESC enhancer starr_24747 Neighboring gene STARR-positive B cell enhancer ABC_E2297 Neighboring gene predicted gene, 51685 Neighboring gene RIKEN cDNA 4930429F24 gene Neighboring gene STARR-positive B cell enhancer ABC_E5090 Neighboring gene transmembrane protein 30A Neighboring gene filamin A interacting protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    cytochrome c oxidase subunit 7A2, mitochondrial
    Names
    cytochrome c oxidase subunit VIIa 2
    cytochrome c oxidase subunit VIIa 3
    cytochrome c oxidase subunit VIIa-L
    cytochrome c oxidase subunit VIIa-liver/heart
    NP_034075.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009945.3NP_034075.2  cytochrome c oxidase subunit 7A2, mitochondrial precursor

      See identical proteins and their annotated locations for NP_034075.2

      Status: VALIDATED

      Source sequence(s)
      CN670202, CN838002
      Consensus CDS
      CCDS23366.1
      UniProtKB/Swiss-Prot
      O54969, P48771, Q545J7
      Related
      ENSMUSP00000034881.7, ENSMUST00000034881.8
      Conserved Domains (1) summary
      cd00928
      Location:2478
      Cyt_c_Oxidase_VIIa; Cytochrome c oxidase subunit VIIa. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      79662523..79667135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)