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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001195496.1 → NP_001182425.1 serine/threonine-protein kinase DCLK2 isoform 1
See identical proteins and their annotated locations for NP_001182425.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is an exon-5-containing transcript (PMIDs:15611072 and 18075264), and encodes the longest isoform (1).
- Source sequence(s)
-
AC102164, AC127237, AC132346
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- smart00220
Location:408 → 665
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:406 → 664
- PKc_like; Protein Kinases, catalytic domain
-
NM_001195497.1 → NP_001182426.1 serine/threonine-protein kinase DCLK2 isoform 3
See identical proteins and their annotated locations for NP_001182426.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) is an exon-5-lacking transcript (PMIDs:15611072 and 18075264). It lacks an in-frame coding exon, as compared to variant 1. The resulting isoform (3) lacks an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AK049179, BC056921, BQ771344, BY361646
- Consensus CDS
-
CCDS79936.1
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Related
- ENSMUSP00000142267.2, ENSMUST00000195561.6
- Conserved Domains (3) summary
-
- smart00220
Location:392 → 649
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:390 → 648
- PKc_like; Protein Kinases, catalytic domain
-
NM_001195498.1 → NP_001182427.1 serine/threonine-protein kinase DCLK2 isoform 4
See identical proteins and their annotated locations for NP_001182427.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) is an exon-5-containing and exon-17-containing transcript (PMIDs:15611072 and 18075264), and represents the longest transcript. It has an additional 3 nts at an alternate splice site and an additional exon in the 3' region, which results in frame-shift, as compared to variant 1. The resulting isoform (4) has an extra aa in the middle region and has a shorter and different C-terminus, as compared to isoform 1.
- Source sequence(s)
-
AC102164, AC127237, AC132346
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- smart00220
Location:409 → 666
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
NM_001195499.1 → NP_001182428.1 serine/threonine-protein kinase DCLK2 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) is an exon-5-containing and exon-17-containing transcript (PMIDs:15611072 and 18075264). It has an additional exon in the 3' region, which results in frame-shift, as compared to variant 1. The resulting isoform (5) has a shorter and different C-terminus, as compared to isoform 1.
- Source sequence(s)
-
AC102164, AC127237, AC132346
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- smart00220
Location:408 → 665
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:406 → 664
- PKc_like; Protein Kinases, catalytic domain
-
NM_001195500.2 → NP_001182429.1 serine/threonine-protein kinase DCLK2 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) is an exon-5-lacking transcript (PMIDs:15611072 and 18075264). It lacks an internal exon and several 3' exons, but has an alternate 3' segment, as compared to variant 1. The resulting isoform (6) lacks an internal segment and is C-terminal truncated, as compared to isoform 1.
- Source sequence(s)
-
AK049126, BQ771344
- Consensus CDS
-
CCDS79935.1
- UniProtKB/TrEMBL
- A0A0A6YWI6, A0A0A6YX33
- Related
- ENSMUSP00000141816.2, ENSMUST00000194452.2
- Conserved Domains (3) summary
-
- smart00220
Location:392 → 590
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:390 → 590
- PKc_like; Protein Kinases, catalytic domain
-
NM_001357460.1 → NP_001344389.1 serine/threonine-protein kinase DCLK2 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AC102164, AC127237, AC132346
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (2) summary
-
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
NM_027539.5 → NP_081815.3 serine/threonine-protein kinase DCLK2 isoform 2
See identical proteins and their annotated locations for NP_081815.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) is an exon-5-lacking transcript (PMIDs:15611072 and 18075264). It lacks an in-frame coding exon and has an additional 3 nts at an alternate splice site, as compared to variant 1. The resulting isoform (2) is shorter; it lacks an internal segment but has a downstream extra aa, as compared to isoform 1.
- Source sequence(s)
-
BC056921, BQ771344, BY361646
- Consensus CDS
-
CCDS17448.1
- UniProtKB/Swiss-Prot
- Q1EDG7, Q1EDG8, Q4H483, Q4W8V1, Q6PGN3, Q8BUU0, Q8BX25
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Related
- ENSMUSP00000029719.9, ENSMUST00000029719.14
- Conserved Domains (3) summary
-
- smart00220
Location:393 → 650
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- smart00537
Location:67 → 157
- DCX; Domain in the Doublecortin (DCX) gene product
- cl21453
Location:391 → 649
- PKc_like; Protein Kinases, catalytic domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
86693457..86828292 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030252823.2 → XP_030108683.1 serine/threonine-protein kinase DCLK2 isoform X23
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Related
- ENSMUSP00000141567.2, ENSMUST00000192773.6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:390 → 637
- PKc_like; Protein Kinases, catalytic domain
-
XM_030252818.2 → XP_030108678.1 serine/threonine-protein kinase DCLK2 isoform X5
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:390 → 638
- PKc_like; Protein Kinases, catalytic domain
-
XM_030252821.2 → XP_030108681.1 serine/threonine-protein kinase DCLK2 isoform X18
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:390 → 648
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502071.4 → XP_006502134.1 serine/threonine-protein kinase DCLK2 isoform X10
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:390 → 648
- PKc_like; Protein Kinases, catalytic domain
-
XM_030252822.2 → XP_030108682.1 serine/threonine-protein kinase DCLK2 isoform X22
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:391 → 638
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502067.4 → XP_006502130.1 serine/threonine-protein kinase DCLK2 isoform X4
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:391 → 639
- PKc_like; Protein Kinases, catalytic domain
-
XM_030252820.2 → XP_030108680.1 serine/threonine-protein kinase DCLK2 isoform X17
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:391 → 649
- PKc_like; Protein Kinases, catalytic domain
-
XM_030252819.2 → XP_030108679.1 serine/threonine-protein kinase DCLK2 isoform X9
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:391 → 649
- PKc_like; Protein Kinases, catalytic domain
-
XM_036163308.1 → XP_036019201.1 serine/threonine-protein kinase DCLK2 isoform X3
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:406 → 654
- PKc_like; Protein Kinases, catalytic domain
-
XM_036163309.1 → XP_036019202.1 serine/threonine-protein kinase DCLK2 isoform X13
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:406 → 664
- PKc_like; Protein Kinases, catalytic domain
-
XM_011240226.3 → XP_011238528.1 serine/threonine-protein kinase DCLK2 isoform X11
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 607
- PKc_like; Protein Kinases, catalytic domain
-
XM_017319719.3 → XP_017175208.1 serine/threonine-protein kinase DCLK2 isoform X24
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 607
- PKc_like; Protein Kinases, catalytic domain
-
XM_011240227.3 → XP_011238529.1 serine/threonine-protein kinase DCLK2 isoform X25
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 607
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502076.4 → XP_006502139.1 serine/threonine-protein kinase DCLK2 isoform X19
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 654
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502070.4 → XP_006502133.1 serine/threonine-protein kinase DCLK2 isoform X8
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 659
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502078.4 → XP_006502141.1 serine/threonine-protein kinase DCLK2 isoform X21
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 654
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502066.4 → XP_006502129.1 serine/threonine-protein kinase DCLK2 isoform X2
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 655
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502074.4 → XP_006502137.1 serine/threonine-protein kinase DCLK2 isoform X15
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Related
- ENSMUSP00000141707.2, ENSMUST00000191752.6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 655
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502072.4 → XP_006502135.1 serine/threonine-protein kinase DCLK2 isoform X12
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502068.4 → XP_006502131.1 serine/threonine-protein kinase DCLK2 isoform X6
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502075.4 → XP_006502138.1 serine/threonine-protein kinase DCLK2 isoform X16
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502069.4 → XP_006502132.1 serine/threonine-protein kinase DCLK2 isoform X7
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502077.4 → XP_006502140.1 serine/threonine-protein kinase DCLK2 isoform X20
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 655
- PKc_like; Protein Kinases, catalytic domain
-
XM_006502073.4 → XP_006502136.1 serine/threonine-protein kinase DCLK2 isoform X14
- UniProtKB/TrEMBL
-
A0A0A6YX71
- Related
- ENSMUSP00000141866.2, ENSMUST00000193632.6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:407 → 665
- PKc_like; Protein Kinases, catalytic domain
-
XM_036163307.1 → XP_036019200.1 serine/threonine-protein kinase DCLK2 isoform X1
- UniProtKB/TrEMBL
-
A0A0A6YWI6
- Conserved Domains (3) summary
-
- cd17069
Location:192 → 275
- DCX2; Dublecortin-like domain 2
- cd17141
Location:70 → 154
- DCX1_DCLK2; Dublecortin-like domain 1 found in doublecortin-like kinase 2 (DCLK2)
- cl21453
Location:390 → 648
- PKc_like; Protein Kinases, catalytic domain
RNA
-
XR_003954386.2 RNA Sequence
-
XR_003954385.2 RNA Sequence
-
XR_003954383.2 RNA Sequence
-
XR_004941394.1 RNA Sequence
-
XR_004941393.1 RNA Sequence
-
XR_003954382.2 RNA Sequence
-
XR_867231.4 RNA Sequence
-
XR_003954387.2 RNA Sequence
-
XR_867229.3 RNA Sequence
-
XR_003954384.2 RNA Sequence
-
XR_004941392.1 RNA Sequence
-
XR_003954381.2 RNA Sequence
-
XR_001783745.3 RNA Sequence
-
XR_004941391.1 RNA Sequence
-
XR_004941390.1 RNA Sequence
-
XR_867230.4 RNA Sequence