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    Add2 adducin 2 [ Mus musculus (house mouse) ]

    Gene ID: 11519, updated on 27-Nov-2024

    Summary

    Official Symbol
    Add2provided by MGI
    Official Full Name
    adducin 2provided by MGI
    Primary source
    MGI:MGI:87919
    See related
    Ensembl:ENSMUSG00000030000 AllianceGenome:MGI:87919
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    add97; 2900072M03Rik
    Summary
    This gene encodes the beta subunit of the adducin family. Adducins, encoded by alpha, beta and gamma genes, are heteromeric proteins that crosslink actin filaments with spectrin at the cytoskeletal membrane. This protein, primarily found in the brain and hematopoietic cells, is regulated by phosphorylation and calmodulin interactions as it promotes spectrin assembly onto actin filaments, bundles actin and caps barbed ends of actin filaments. In mouse, deficiency of this gene can lead to mild hemolytic anemia and impaired synaptic plasticity. Mutations of this gene in mouse serve as a pathophysiological model for hereditary spherocytosis and hereditary elliptocytosis. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Dec 2012]
    Expression
    Biased expression in CNS E18 (RPKM 33.1), whole brain E14.5 (RPKM 28.0) and 10 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Add2 in Genome Data Viewer
    Location:
    6 C3- D1; 6 37.55 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (86005663..86101391)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (86028681..86124409)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930553P18 gene Neighboring gene predicted gene, 33319 Neighboring gene folliculogenesis specific basic helix-loop-helix Neighboring gene predicted gene, 19596 Neighboring gene transforming growth factor alpha

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables actin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein dimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables spectrin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables spectrin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables structural constituent of cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in actin filament bundle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in barbed-end actin filament capping IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in barbed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in barbed-end actin filament capping ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in leukocyte migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in leukocyte tethering or rolling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in leukocyte tethering or rolling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in monoatomic ion transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein-containing complex assembly ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein-containing complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in synapse assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in synapse assembly IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in synapse assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of F-actin capping protein complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of F-actin capping protein complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasmic vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane raft IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in postsynaptic density IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    beta-adducin
    Names
    adducin 2 (beta)
    erythrocyte adducin subunit beta
    snoRNA MBII-396

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271857.1NP_001258786.1  beta-adducin isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
      Source sequence(s)
      AI835294, AK014496, AK147544, BE951615, BU058008, BU708888, BY146240, BY712734, CB519116, CB524359, CB722600
      Consensus CDS
      CCDS20308.1
      UniProtKB/Swiss-Prot
      Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
      UniProtKB/TrEMBL
      Q8C0Y2
      Conserved Domains (3) summary
      PRK08724
      Location:410598
      fliD; flagellar filament capping protein FliD
      TIGR00601
      Location:562664
      rad23; UV excision repair protein Rad23
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    2. NM_001271858.1NP_001258787.1  beta-adducin isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
      Source sequence(s)
      AI835294, AK014496, AK029488, AK147544, BE951615, BU058008, BU708888, BY146240, BY712734, CB519116, CB524359, CB722600
      Consensus CDS
      CCDS20308.1
      UniProtKB/Swiss-Prot
      Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
      UniProtKB/TrEMBL
      Q8C0Y2
      Related
      ENSMUSP00000145160.2, ENSMUST00000204059.3
      Conserved Domains (3) summary
      PRK08724
      Location:410598
      fliD; flagellar filament capping protein FliD
      TIGR00601
      Location:562664
      rad23; UV excision repair protein Rad23
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    3. NM_001271859.1NP_001258788.1  beta-adducin isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
      Source sequence(s)
      AC158645
      Consensus CDS
      CCDS20308.1
      UniProtKB/Swiss-Prot
      Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
      UniProtKB/TrEMBL
      Q8C0Y2
      Related
      ENSMUSP00000145296.2, ENSMUST00000203724.3
      Conserved Domains (3) summary
      PRK08724
      Location:410598
      fliD; flagellar filament capping protein FliD
      TIGR00601
      Location:562664
      rad23; UV excision repair protein Rad23
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    4. NM_001271860.1NP_001258789.1  beta-adducin isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (5) lacks several 3' exons and contains an alternate 3' exon, and thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1. Both variants 5 and 6 encode the same isoform (2, also known as beta-2).
      Source sequence(s)
      BC053032, BY146240
      Consensus CDS
      CCDS85085.1
      UniProtKB/Swiss-Prot
      Q9QYB8
      Related
      ENSMUSP00000144849.2, ENSMUST00000203366.3
      Conserved Domains (1) summary
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    5. NM_001271861.1NP_001258790.1  beta-adducin isoform 2

      Status: REVIEWED

      Description
      Transcript Variant: This variant (6) differs in the 5' UTR, lacks several 3' exons and contains an alternate 3' exon, and thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1. Both variants 5 and 6 encode the same isoform (2, also known as beta-2).
      Source sequence(s)
      AC158645, AK028425, BC053032
      Consensus CDS
      CCDS85085.1
      UniProtKB/Swiss-Prot
      Q9QYB8
      Related
      ENSMUSP00000145034.2, ENSMUST00000205034.3
      Conserved Domains (1) summary
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...
    6. NM_013458.5NP_038486.2  beta-adducin isoform 1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same isoform (1, also known as beta-1).
      Source sequence(s)
      AC158645, AI835294, AK014496, AK147544, BE951615, BU058008, BU708888, BY712734, CB519116, CB524359, CB722600
      Consensus CDS
      CCDS20308.1
      UniProtKB/Swiss-Prot
      Q3U0E1, Q80VH9, Q8C1C4, Q9CXE3, Q9JLE4, Q9JLE5, Q9QYB7, Q9QYB8
      UniProtKB/TrEMBL
      Q8C0Y2
      Related
      ENSMUSP00000032069.6, ENSMUST00000032069.8
      Conserved Domains (3) summary
      PRK08724
      Location:410598
      fliD; flagellar filament capping protein FliD
      TIGR00601
      Location:562664
      rad23; UV excision repair protein Rad23
      cl00214
      Location:130379
      Aldolase_II; Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      86005663..86101391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)