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    FAM27E3 family with sequence similarity 27 member E3 [ Homo sapiens (human) ]

    Gene ID: 100131997, updated on 10-Dec-2024

    Summary

    Official Symbol
    FAM27E3provided by HGNC
    Official Full Name
    family with sequence similarity 27 member E3provided by HGNC
    Primary source
    HGNC:HGNC:28655
    See related
    AllianceGenome:HGNC:28655
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 5.4), kidney (RPKM 2.3) and 21 other tissues See more
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    Genomic context

    See FAM27E3 in Genome Data Viewer
    Location:
    9q21.11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (67717498..67719179, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (79500184..79501865, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (67784944..67786625, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105379453 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:67756597-67757414 Neighboring gene uncharacterized LOC102723709 Neighboring gene family with sequence similarity 27 member B Neighboring gene ReSE screen-validated silencer GRCh37_chr9:45710113-45710280 Neighboring gene RNA, 7SL, cytoplasmic 787, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_103833.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC032035, BC119675, BC127258

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      67717498..67719179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      79500184..79501865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)