FAM230C family with sequence similarity 230 member C [Homo sapiens (human)] - Gene

Summary

Official Symbol: FAM230Cprovided by HGNC
Official Full Name: family with sequence similarity 230 member Cprovided by HGNC
Primary source: HGNC:HGNC:24482
See related: Ensembl:ENSG00000279516 AllianceGenome:HGNC:24482
Gene type: ncRNA
RefSeq status: VALIDATED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: LINC00281; NCRNA00281
Expression: Restricted expression toward testis (RPKM 2.0) See more
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Genomic context

Location:: 13q11

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	13	NC_000013.11 (18195297..18232016)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	13	NC_060937.1 (13678802..13717342, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	Unplaced Scaffold	NT_113923.1 (24049..60768)

Chromosome 13 - NC_000013.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Tissue-specific circular RNA induction during human fetal development
Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
BioProject: PRJNA270632
Publication: PMID 26076956
Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

FAM230C contains copies of the DNA translocation breakpoint/AT-rich sequence.
Title: A family of long intergenic non-coding RNA genes in human chromosomal region 22q11.2 carry a DNA translocation breakpoint/AT-rich sequence.

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

RH80696 (e-PCR)
- UniSTS:89725

GDB:451583 (e-PCR)
- UniSTS:157318

Other Names

long intergenic non-protein coding RNA 281

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.